@10:29:29.51PDT01-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @10:29:29.53 >BREAK< ESP3 Gateway v0.99 for cartridge bus @10:29:30.81 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @10:29:31.93 Polling Can every 5:00 @10:29:32.23 Clients may connect on TCP port 9999 @10:29:32.24 Connecting to 10.89.5.2:9999 @10:29:32.27 Waiting for espclients... @10:29:32.63 Session Begun @10:29:34.96 -> showStatus @10:29:36.57 -> Cmd.loadCartridge @10:29:36.69 Gate.power :main,:ON,limit to 5000mA @10:29:36.71 Gate.power :analytic1,:ON,limit to 5000mA @10:29:36.73 Gate.power :analytic2,:ON,limit to 5000mA @10:29:36.75 Gate.power :analytic3,:ON,limit to 5000mA @10:29:36.90 Powering core bus @10:29:39.20 SPR Module 1, FW Rev. B, FPGA Rev. C @10:29:39.30 ArS.configure ArSconfig @10:29:39.40 LyS1.configure LyS1config @10:29:39.52 LyS2.configure LyS2config @10:29:39.63 AirS.configure AirSconfig @10:29:39.74 TV.configure TVconfig @10:29:39.86 SP.configure SPconfig @10:29:40.00 SC.configure SCconfig @10:29:40.12 PV.configure PVconfig @10:29:40.24 PinPort.configure PPconfig @10:29:40.35 Sea.configure SPconfig @10:29:40.41 All elf controllers running firmware version 4.46 @10:29:40.43 Gate.power :motor,:ON,limit to 5000mA @10:29:40.56 ArS.reconfigure ArSconfig @10:29:40.78 ArS.home.jog 0 @10:29:41.02 PV.reconfigure PVconfig @10:29:41.08 TV.reconfigure TVconfig @10:29:41.11 LyS2.reconfigure LyS2config @10:29:41.18 LyS1.reconfigure LyS1config @10:29:41.23 PinPort.reconfigure PPconfig @10:29:41.26 AirS.reconfigure AirSconfig @10:29:41.42 PV.home.jog 0 @10:29:41.48 TV.home.jog 0 @10:29:41.51 LyS2.home.jog 0 @10:29:41.53 PinPort.home.jog 0 @10:29:41.58 AirS.home.jog 0 @10:29:41.60 LyS1.home.jog 0 @10:29:42.17 ArS.reconfigure HomeMagSyringe @10:29:42.35 PV.reconfigure HomePV @10:29:42.38 TV.reconfigure HomeTV @10:29:42.43 LyS2.reconfigure HomeSyringe @10:29:42.46 ArS.jog -269 @10:29:42.50 AirS.reconfigure HomeMagSyringe @10:29:42.53 PinPort.reconfigure HomePP @10:29:42.60 LyS1.reconfigure HomeSyringe @10:29:42.75 PV.jog -242 @10:29:42.80 TV.jog -545 @10:29:42.83 LyS2.jog -268 @10:29:42.88 AirS.jog -302 @10:29:42.92 PinPort.jog -111 @10:29:43.00 LyS1.jog -259 @10:29:43.23 ArS.setRawPosition! -50 @10:29:43.28 ArS.seek :home @10:29:43.48 PinPort.setRawPosition! 0 @10:29:43.49 PV.setRawPosition! -50 @10:29:43.58 PinPort.seek :home @10:29:43.71 PV.seek :home @10:29:44.06 AirS.setRawPosition! -50 @10:29:44.10 LyS1.setRawPosition! -50 @10:29:44.12 ArS.reconfigure ArSconfig @10:29:44.15 LyS2.setRawPosition! -50 @10:29:44.19 PinPort.reconfigure PPconfig @10:29:44.31 AirS.seek :home @10:29:44.41 LyS1.seek :home @10:29:44.44 LyS2.seek :home @10:29:44.68 PV.reconfigure PVconfig @10:29:44.79 AirS.reconfigure AirSconfig @10:29:44.91 TV.setRawPosition! 0 @10:29:44.94 LyS2.reconfigure LyS2config @10:29:44.96 LyS1.reconfigure LyS1config @10:29:45.09 TV.seek :home @10:29:45.22 TV.reconfigure TVconfig @10:29:45.58 TV.seek :clear @10:29:47.20 TV.coast @10:29:47.26 SC.reconfigure HomeSC @10:29:47.32 SC.home.jog 0 @10:29:48.07 SC.reconfigure SCconfig @10:29:48.13 SC.seek 59 @10:29:48.24 Selecting Cartridge 59 @10:29:48.47 LyS2.seek :locked @10:29:48.59 PV.seek :locked @10:29:48.73 AirS.seek :locked @10:29:52.81 Powering cartridge bus @10:29:54.93 Gate.setIR 1750,5000,0,6 @10:29:55.06 Gate.setIR 0,5000,0,6 @10:29:55.11 Loaded Lyse-n-Go Cartridge @10:29:55.12 PuckHeater.configure HeatConfig @10:29:55.18 Gate.power :heat,:ON,limit to 5000mA @10:30:14.90 -> Cmd.startFiltering @10:30:15.14 Duration of filtering limited to 1:05:00 @10:30:15.39 Priming sample loop w/100ml, bypass w/10ml @10:30:15.47 SP.setPosition! 0ml @10:30:15.51 Intake.open @10:30:15.56 Exhaust.open @10:30:16.35 Sea @-42.9psia @10:30:16.37 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @10:30:21.89 Vacuum tare is 22% of full scale @10:30:21.91 PB.open @10:30:21.95 Exhaust.close @10:30:22.75 Sea @-42.9psia @10:30:22.84 SP.reconfigure SPprime @10:30:22.91 SP.seek 10ml,1:21 @10:30:33.78 SP.setPosition! 0ml @10:30:34.08 PB.close @10:30:34.12 Exhaust.open @10:30:34.93 Sea @-42.9psia @10:30:35.02 SP.reconfigure SPprime @10:30:35.09 SP.seek 100ml,8:51 @10:32:22.70 Pressurizing cartridge to 26psi @10:32:22.71 Intake.close @10:32:23.44 SP.setPosition! 0ml @10:32:23.49 PB.open @10:32:24.30 TV.seek :crack @10:32:25.10 TV.seek :clear @10:32:25.89 Intake.open @10:32:27.33 PB.close @10:32:28.04 Exhaust.close @10:32:28.81 Sea @-42.9psia @10:32:28.90 SP.reconfigure SPcharge @10:32:28.96 SP.seek 7.5ml,1:08 @10:32:43.76 Cartridge pressurized with 1.029ml to 26.0psi @10:32:44.13 delay 3 seconds @10:32:47.20 Cartridge at 21.9psi 3 seconds later @10:32:47.28 TV.seek :cartridge @10:32:49.10 TV.seek :clear @10:32:50.92 Sampling 1000.0ml @10:32:50.93 SP.setPosition! 0ml @10:32:50.98 Exhaust.open @10:32:51.75 Sea @-42.9psia @10:32:51.85 SP.reconfigure SPsample @10:32:51.91 SP.seek 1000ml,1:23:53 @10:32:52.87 Cartridge 59 sampling 0/1000ml at 0.17ml/s with 3.0psi vacuum @10:33:52.87 Cartridge 59 sampling 34/1000ml at 0.55ml/s with 15.9psi vacuum @10:34:52.87 Cartridge 59 sampling 68/1000ml at 0.59ml/s with 20.4psi vacuum @10:35:52.87 Cartridge 59 sampling 102/1000ml at 0.57ml/s with 24.3psi vacuum @10:36:52.88 Cartridge 59 sampling 137/1000ml at 0.58ml/s with 24.7psi vacuum @10:37:52.87 Cartridge 59 sampling 171/1000ml at 0.57ml/s with 21.4psi vacuum @10:38:52.88 Cartridge 59 sampling 205/1000ml at 0.57ml/s with 24.9psi vacuum @10:39:52.86 Cartridge 59 sampling 238/1000ml at 0.57ml/s with 25.6psi vacuum @10:40:52.88 Cartridge 59 sampling 272/1000ml at 0.59ml/s with 24.1psi vacuum @10:41:52.87 Cartridge 59 sampling 306/1000ml at 0.54ml/s with 24.1psi vacuum @10:42:52.87 Cartridge 59 sampling 339/1000ml at 0.53ml/s with 22.7psi vacuum @10:43:52.88 Cartridge 59 sampling 373/1000ml at 0.58ml/s with 24.5psi vacuum @10:44:52.87 Cartridge 59 sampling 406/1000ml at 0.56ml/s with 25.4psi vacuum @10:45:52.87 Cartridge 59 sampling 439/1000ml at 0.57ml/s with 20.1psi vacuum @10:46:52.88 Cartridge 59 sampling 472/1000ml at 0.55ml/s with 23.7psi vacuum @10:47:52.88 Cartridge 59 sampling 505/1000ml at 0.57ml/s with 24.5psi vacuum @10:48:52.87 Cartridge 59 sampling 537/1000ml at 0.53ml/s with 27.9psi vacuum @10:49:52.88 Cartridge 59 sampling 570/1000ml at 0.55ml/s with 24.3psi vacuum @10:50:52.88 Cartridge 59 sampling 602/1000ml at 0.56ml/s with 24.5psi vacuum @10:51:52.88 Cartridge 59 sampling 635/1000ml at 0.54ml/s with 20.4psi vacuum @10:52:53.14 Cartridge 59 sampling 667/1000ml at 0.55ml/s with 25.9psi vacuum @10:53:52.87 Cartridge 59 sampling 700/1000ml at 0.54ml/s with 24.1psi vacuum @10:54:52.88 Cartridge 59 sampling 732/1000ml at 0.51ml/s with 22.7psi vacuum @10:55:52.88 Cartridge 59 sampling 764/1000ml at 0.52ml/s with 14.7psi vacuum @10:56:52.88 Cartridge 59 sampling 796/1000ml at 0.56ml/s with 20.3psi vacuum @10:57:52.88 Cartridge 59 sampling 829/1000ml at 0.56ml/s with 24.4psi vacuum @10:58:52.88 Cartridge 59 sampling 861/1000ml at 0.55ml/s with 21.9psi vacuum @10:59:52.88 Cartridge 59 sampling 893/1000ml at 0.52ml/s with 14.7psi vacuum @11:00:52.87 Cartridge 59 sampling 926/1000ml at 0.55ml/s with 20.7psi vacuum @11:01:52.88 Cartridge 59 sampling 959/1000ml at 0.52ml/s with 20.1psi vacuum @11:02:52.88 Cartridge 59 sampling 991/1000ml at 0.55ml/s with 22.3psi vacuum @11:03:13.57 Intake.close @11:03:13.62 Exhaust.close @11:03:14.35 Sampled 1000.0ml @11:03:14.44 TV.seek :bypass @11:03:16.06 TV.seek :clear @11:03:18.30 -> Cmd.startProcessing @11:03:20.08 SPR.command "read_sequences" @11:03:20.32 SPR.command "stats_on" @11:03:20.36 SPR.command "start 2 0" @11:03:22.37 Begun log /var/log/esp/spr18aug0111h.spr @11:03:23.17 Handoff.select :waste @11:03:23.29 ArS.seek empty @11:03:41.01 PinPort.seek :cartridge @11:03:46.72 LyS1.seek 1350ul @11:03:52.66 PV.seek :reagent @11:03:53.49 AirS.seek :tVent @11:03:55.55 delay 2 seconds @11:03:57.58 AirS.reconfigure EvacAirS @11:03:57.65 AirS.seek :evac @11:04:19.95 delay 15 seconds @11:04:34.97 AirS.reconfigure AirSconfig @11:04:35.03 AirS.seek :tVent @11:04:49.23 delay 2 seconds @11:04:51.26 AirS.reconfigure EvacAirS @11:04:51.31 AirS.seek :evac @11:05:13.60 delay 15 seconds @11:05:28.63 AirS.reconfigure AirSconfig @11:05:28.69 AirS.seek :tVent @11:05:42.89 delay 2 seconds @11:05:44.92 AirS.reconfigure EvacAirS @11:05:44.98 AirS.seek :evac @11:06:07.28 delay 15 seconds @11:06:22.32 AirS.reconfigure AirSconfig @11:06:22.38 AirS.seek :tVent @11:06:36.61 delay 2 seconds @11:06:38.64 AirS.reconfigure EvacAirS @11:06:38.70 AirS.seek :evac @11:07:00.99 delay 15 seconds @11:07:16.02 AirS.reconfigure AirSconfig @11:07:16.08 AirS.seek :tVent @11:07:30.28 delay 2 seconds @11:07:32.31 AirS.reconfigure EvacAirS @11:07:32.36 AirS.seek :evac @11:07:54.68 delay 15 seconds @11:08:09.70 delay 1:30 @11:09:39.72 AirS.reconfigure AirSconfig @11:09:39.78 AirS.seek :fVent @11:09:41.21 delay 15 seconds @11:09:56.24 LyS1.reconfigure SlowLyS1 @11:09:56.35 LyS1.seek 1050ul @11:10:26.36 delay 5 seconds @11:10:31.38 Handoff.select :blocked @11:10:31.55 LyS1.seek 450ul @11:11:31.47 delay 10 seconds @11:11:41.50 AirS.reconfigure SlowAirS @11:11:41.61 AirS.reconfigure to mix into 1.37806 parts LyS1 @11:11:42.02 AirS.seek evac @11:11:42.06 LyS1.seek 300ul @11:11:57.15 AirS.reconfigure AirSconfig @11:11:57.21 AirS.seek :full @11:12:11.45 LyS1.seek :empty @11:12:41.51 PuckHeater.seek 84.2C @11:13:36.53 PuckHeater.hold 15:00,84.2C @11:28:31.28 LyS1.reconfigure LyS1config @11:28:31.36 LyS1.seek 900ul @11:28:39.70 AirS.seek :tVent @11:28:39.78 delay 2 seconds @11:28:41.81 AirS.reconfigure HalfSpeedAirS @11:28:41.87 AirS.seek :evac @11:29:09.59 delay 15 seconds @11:29:24.62 AirS.reconfigure AirSconfig @11:29:24.68 AirS.seek :tVent @11:29:38.88 delay 2 seconds @11:29:40.91 AirS.reconfigure HalfSpeedAirS @11:29:40.96 AirS.seek :evac @11:30:08.79 delay 15 seconds @11:30:23.85 AirS.reconfigure AirSconfig @11:30:23.93 AirS.seek :tVent @11:30:38.13 delay 2 seconds @11:30:40.16 AirS.reconfigure HalfSpeedAirS @11:30:40.21 AirS.seek :evac @11:31:07.93 delay 15 seconds @11:31:22.96 delay 1:00 @11:32:22.98 Handoff.select :waste @11:32:23.09 delay 15 seconds @11:32:38.11 AirS.seek :fVent @11:32:40.30 delay 10 seconds @11:32:50.33 AirS.reconfigure AirSconfig @11:32:50.38 AirS.seek :evac @11:32:51.82 Lysis Recovered in LyS1 @11:32:51.83 Lysis Complete @11:32:51.85 Handoff.select :waste @11:32:51.87 LyS2.seek :full @11:32:51.96 LyS1.reconfigure DAmixLyS1 @11:32:52.02 LyS2.reconfigure DAmixLyS2 @11:32:52.41 LyS2.seek 1480ul @11:32:52.45 LyS1.seek 650ul @11:33:39.73 delay 5 seconds @11:33:44.75 Handoff.select :SPR @11:33:44.87 SPR.command "start 1 14" @11:33:45.78 Running Experiment-Rep #1 @11:33:45.79 delay 10 seconds @11:33:55.81 SPR.command "start 1 0" @11:33:59.14 Waiting up to 4:00 for SPR to enter state 1 @11:36:03.43 SPR.command "hold_on" @11:36:05.14 LyS2.seek 1130ul @11:36:05.18 LyS1.seek 300ul @11:37:11.29 delay 15 seconds @11:37:26.32 SPR.command "hold_off" @11:37:29.63 Waiting up to 25:00 for SPR to enter state 7 @11:57:34.47 Handoff.select :waste @11:57:34.60 LyS1.reconfigure LyS1config @11:57:34.66 LyS2.reconfigure LyS2config @11:57:34.72 Rep #1 SPR Analysis has Completed @11:57:35.40 Ended log /var/log/esp/spr18aug0111h.spr @11:57:35.65 SPR.command "stats_off" @11:57:37.34 -> Cmd.stop @11:57:37.43 Handoff.select :close @11:57:37.62 Gate.power :heat,:OFF @11:57:37.64 Gate.power :cartridge,:OFF @11:57:37.66 PV.seek :locked @11:57:38.57 PinPort.seek :clear @11:57:44.35 ArS.seek :clear @11:57:44.48 LyS1.seek :clear @11:57:44.61 LyS2.seek :clear @11:57:44.74 AirS.seek :clear @11:58:02.11 ArS.coast @11:58:02.16 LyS1.coast @11:58:02.21 LyS2.coast @11:58:02.26 AirS.coast @11:58:02.31 TV.coast @11:58:02.36 SP.coast @11:58:02.41 SC.coast @11:58:02.46 PV.coast @11:58:02.52 PinPort.coast @11:58:02.70 Gate.power :motor,:OFF @11:58:02.71 Gate.power :main,:OFF @11:58:02.73 Gate.power :core,:OFF @11:58:02.75 Gate.power :analytic1,:OFF @11:58:02.78 Gate.power :analytic2,:OFF @11:58:02.79 Gate.power :analytic3,:OFF @11:58:02.81 Safely stopped and ready to power off