@22:47:17.63PDT01-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @22:47:17.64 >BREAK< ESP3 Gateway v0.99 for cartridge bus @22:47:18.88 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @22:47:20.01 Polling Can every 5:00 @22:47:20.31 Clients may connect on TCP port 9999 @22:47:20.32 Connecting to 10.89.5.2:9999 @22:47:20.36 Waiting for espclients... @22:47:20.68 Session Begun @22:47:22.62 -> showStatus @22:47:24.63 -> Cmd.loadCartridge @22:47:24.76 Gate.power :main,:ON,limit to 5000mA @22:47:24.77 Gate.power :analytic1,:ON,limit to 5000mA @22:47:24.80 Gate.power :analytic2,:ON,limit to 5000mA @22:47:24.82 Gate.power :analytic3,:ON,limit to 5000mA @22:47:24.96 Powering core bus @22:47:27.26 SPR Module 1, FW Rev. B, FPGA Rev. C @22:47:27.36 ArS.configure ArSconfig @22:47:27.46 LyS1.configure LyS1config @22:47:27.58 LyS2.configure LyS2config @22:47:27.69 AirS.configure AirSconfig @22:47:27.80 TV.configure TVconfig @22:47:27.92 SP.configure SPconfig @22:47:28.04 SC.configure SCconfig @22:47:28.16 PV.configure PVconfig @22:47:28.28 PinPort.configure PPconfig @22:47:28.40 Sea.configure SPconfig @22:47:28.45 All elf controllers running firmware version 4.46 @22:47:28.48 Gate.power :motor,:ON,limit to 5000mA @22:47:28.66 ArS.reconfigure ArSconfig @22:47:28.93 ArS.home.jog 0 @22:47:29.06 PV.reconfigure PVconfig @22:47:29.13 TV.reconfigure TVconfig @22:47:29.17 LyS2.reconfigure LyS2config @22:47:29.20 LyS1.reconfigure LyS1config @22:47:29.26 PinPort.reconfigure PPconfig @22:47:29.30 AirS.reconfigure AirSconfig @22:47:29.50 PV.home.jog 0 @22:47:29.52 LyS2.home.jog 0 @22:47:29.55 TV.home.jog 0 @22:47:29.57 LyS1.home.jog 0 @22:47:29.61 PinPort.home.jog 0 @22:47:29.65 AirS.home.jog 0 @22:47:30.02 ArS.reconfigure HomeMagSyringe @22:47:30.32 ArS.jog -272 @22:47:30.49 PV.reconfigure HomePV @22:47:30.52 TV.reconfigure HomeTV @22:47:30.55 LyS2.reconfigure HomeSyringe @22:47:30.59 PinPort.reconfigure HomePP @22:47:30.63 AirS.reconfigure HomeMagSyringe @22:47:30.66 LyS1.reconfigure HomeSyringe @22:47:30.88 PV.jog -1491 @22:47:30.91 PinPort.jog -108 @22:47:30.94 LyS2.jog -259 @22:47:30.96 LyS1.jog -270 @22:47:31.00 TV.jog -548 @22:47:31.03 AirS.jog -316 @22:47:31.26 ArS.setRawPosition! -50 @22:47:31.31 ArS.seek :home @22:47:31.43 PinPort.setRawPosition! 0 @22:47:31.47 PinPort.seek :home @22:47:31.57 PinPort.reconfigure PPconfig @22:47:31.90 ArS.reconfigure ArSconfig @22:47:31.99 AirS.setRawPosition! -50 @22:47:32.01 LyS2.setRawPosition! -50 @22:47:32.03 LyS1.setRawPosition! -50 @22:47:32.13 AirS.seek :home @22:47:32.17 LyS2.seek :home @22:47:32.22 LyS1.seek :home @22:47:32.43 PV.setRawPosition! -50 @22:47:32.48 PV.seek :home @22:47:32.61 AirS.reconfigure AirSconfig @22:47:32.69 LyS2.reconfigure LyS2config @22:47:32.72 LyS1.reconfigure LyS1config @22:47:32.85 PV.reconfigure PVconfig @22:47:33.05 TV.setRawPosition! 0 @22:47:33.10 TV.seek :home @22:47:33.19 TV.reconfigure TVconfig @22:47:33.34 TV.seek :clear @22:47:34.96 TV.coast @22:47:35.02 SC.reconfigure HomeSC @22:47:35.08 SC.home.jog 0 @22:47:35.84 SC.reconfigure SCconfig @22:47:35.90 SC.seek 57 @22:47:35.99 Selecting Cartridge 56 @22:47:36.30 SC.seek 56 @22:47:36.80 LyS2.seek :locked @22:47:36.92 PV.seek :locked @22:47:37.06 AirS.seek :locked @22:47:41.14 Powering cartridge bus @22:47:43.26 Gate.setIR 1750,5000,0,6 @22:47:43.39 Gate.setIR 0,5000,0,6 @22:47:43.44 Loaded Lyse-n-Go Cartridge @22:47:43.45 PuckHeater.configure HeatConfig @22:47:43.50 Gate.power :heat,:ON,limit to 5000mA @22:48:03.37 -> Cmd.startFiltering @22:48:03.60 Duration of filtering limited to 1:05:00 @22:48:03.85 Priming sample loop w/100ml, bypass w/10ml @22:48:03.92 SP.setPosition! 0ml @22:48:03.97 Intake.open @22:48:04.01 Exhaust.open @22:48:04.80 Sea @-42.9psia @22:48:04.82 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @22:48:10.35 Vacuum tare is 22% of full scale @22:48:10.37 PB.open @22:48:10.41 Exhaust.close @22:48:11.43 Sea @-42.9psia @22:48:11.51 SP.reconfigure SPprime @22:48:11.58 SP.seek 10ml,1:21 @22:48:22.45 SP.setPosition! 0ml @22:48:22.50 PB.close @22:48:22.53 Exhaust.open @22:48:23.35 Sea @-42.9psia @22:48:23.44 SP.reconfigure SPprime @22:48:23.51 SP.seek 100ml,8:51 @22:50:09.46 Pressurizing cartridge to 26psi @22:50:09.47 Intake.close @22:50:10.23 SP.setPosition! 0ml @22:50:10.28 PB.open @22:50:11.02 TV.seek :crack @22:50:11.81 TV.seek :clear @22:50:12.60 Intake.open @22:50:14.06 PB.close @22:50:14.77 Exhaust.close @22:50:15.55 Sea @-42.9psia @22:50:15.64 SP.reconfigure SPcharge @22:50:15.70 SP.seek 7.5ml,1:08 @22:50:30.35 Cartridge pressurized with 1.007ml to 26.3psi @22:50:30.73 delay 3 seconds @22:50:33.80 Cartridge at 20.6psi 3 seconds later @22:50:33.88 TV.seek :cartridge @22:50:35.71 TV.seek :clear @22:50:37.53 Sampling 1000.0ml @22:50:37.54 SP.setPosition! 0ml @22:50:37.58 Exhaust.open @22:50:38.33 Sea @-42.9psia @22:50:38.42 SP.reconfigure SPsample @22:50:38.49 SP.seek 1000ml,1:23:53 @22:50:39.45 Cartridge 56 sampling 0/1000ml at 0.17ml/s with 3.7psi vacuum @22:51:39.46 Cartridge 56 sampling 35/1000ml at 0.56ml/s with 24.1psi vacuum @22:52:39.46 Cartridge 56 sampling 70/1000ml at 0.56ml/s with 24.2psi vacuum @22:53:39.45 Cartridge 56 sampling 105/1000ml at 0.56ml/s with 22.2psi vacuum @22:54:39.46 Cartridge 56 sampling 140/1000ml at 0.59ml/s with 24.2psi vacuum @22:55:39.46 Cartridge 56 sampling 175/1000ml at 0.61ml/s with 20.5psi vacuum @22:56:39.46 Cartridge 56 sampling 210/1000ml at 0.58ml/s with 18.1psi vacuum @22:57:39.44 Cartridge 56 sampling 245/1000ml at 0.56ml/s with 22.8psi vacuum @22:58:39.46 Cartridge 56 sampling 280/1000ml at 0.61ml/s with 21.1psi vacuum @22:59:39.46 Cartridge 56 sampling 315/1000ml at 0.56ml/s with 27.4psi vacuum @23:00:39.46 Cartridge 56 sampling 350/1000ml at 0.58ml/s with 18.5psi vacuum @23:01:39.46 Cartridge 56 sampling 385/1000ml at 0.60ml/s with 25.8psi vacuum @23:02:39.44 Cartridge 56 sampling 419/1000ml at 0.56ml/s with 23.7psi vacuum @23:03:39.46 Cartridge 56 sampling 454/1000ml at 0.59ml/s with 22.8psi vacuum @23:04:39.45 Cartridge 56 sampling 489/1000ml at 0.61ml/s with 24.7psi vacuum @23:05:39.46 Cartridge 56 sampling 524/1000ml at 0.57ml/s with 16.4psi vacuum @23:06:39.46 Cartridge 56 sampling 559/1000ml at 0.56ml/s with 25.8psi vacuum @23:07:39.71 Cartridge 56 sampling 594/1000ml at 0.56ml/s with 22.7psi vacuum @23:08:39.46 Cartridge 56 sampling 629/1000ml at 0.56ml/s with 24.0psi vacuum @23:09:39.46 Cartridge 56 sampling 664/1000ml at 0.58ml/s with 19.0psi vacuum @23:10:39.46 Cartridge 56 sampling 699/1000ml at 0.60ml/s with 18.6psi vacuum @23:11:39.46 Cartridge 56 sampling 734/1000ml at 0.60ml/s with 25.0psi vacuum @23:12:39.45 Cartridge 56 sampling 768/1000ml at 0.60ml/s with 24.8psi vacuum @23:13:39.46 Cartridge 56 sampling 803/1000ml at 0.60ml/s with 25.0psi vacuum @23:14:39.46 Cartridge 56 sampling 838/1000ml at 0.60ml/s with 21.8psi vacuum @23:15:39.46 Cartridge 56 sampling 873/1000ml at 0.60ml/s with 22.5psi vacuum @23:16:39.46 Cartridge 56 sampling 908/1000ml at 0.56ml/s with 22.5psi vacuum @23:17:39.46 Cartridge 56 sampling 943/1000ml at 0.60ml/s with 24.6psi vacuum @23:18:39.46 Cartridge 56 sampling 978/1000ml at 0.56ml/s with 16.2psi vacuum @23:19:17.98 Intake.close @23:19:18.04 Exhaust.close @23:19:18.77 Sampled 1000.0ml @23:19:18.85 TV.seek :bypass @23:19:20.47 TV.seek :clear @23:19:22.90 -> Cmd.startProcessing @23:19:24.71 SPR.command "read_sequences" @23:19:25.30 SPR.command "stats_on" @23:19:25.34 SPR.command "start 2 0" @23:19:27.35 Begun log /var/log/esp/spr18aug0123h.spr @23:19:28.15 Handoff.select :waste @23:19:28.27 ArS.seek empty @23:19:46.00 PinPort.seek :cartridge @23:19:51.71 LyS1.seek 1350ul @23:19:57.66 PV.seek :reagent @23:19:58.49 AirS.seek :tVent @23:20:00.55 delay 2 seconds @23:20:02.58 AirS.reconfigure EvacAirS @23:20:02.63 AirS.seek :evac @23:20:24.94 delay 15 seconds @23:20:39.97 AirS.reconfigure AirSconfig @23:20:40.03 AirS.seek :tVent @23:20:54.24 delay 2 seconds @23:20:56.27 AirS.reconfigure EvacAirS @23:20:56.32 AirS.seek :evac @23:21:18.62 delay 15 seconds @23:21:33.65 AirS.reconfigure AirSconfig @23:21:33.71 AirS.seek :tVent @23:21:47.92 delay 2 seconds @23:21:49.95 AirS.reconfigure EvacAirS @23:21:50.00 AirS.seek :evac @23:22:12.55 delay 15 seconds @23:22:27.58 AirS.reconfigure AirSconfig @23:22:27.64 AirS.seek :tVent @23:22:41.84 delay 2 seconds @23:22:43.87 AirS.reconfigure EvacAirS @23:22:43.92 AirS.seek :evac @23:23:06.21 delay 15 seconds @23:23:21.24 AirS.reconfigure AirSconfig @23:23:21.30 AirS.seek :tVent @23:23:35.52 delay 2 seconds @23:23:37.55 AirS.reconfigure EvacAirS @23:23:37.60 AirS.seek :evac @23:23:59.90 delay 15 seconds @23:24:14.92 delay 1:30 @23:25:44.94 AirS.reconfigure AirSconfig @23:25:44.99 AirS.seek :fVent @23:25:46.42 delay 15 seconds @23:26:01.45 LyS1.reconfigure SlowLyS1 @23:26:01.55 LyS1.seek 1050ul @23:26:31.59 delay 5 seconds @23:26:36.62 Handoff.select :blocked @23:26:36.78 LyS1.seek 450ul @23:27:36.76 delay 10 seconds @23:27:46.79 AirS.reconfigure SlowAirS @23:27:46.89 AirS.reconfigure to mix into 1.37806 parts LyS1 @23:27:47.45 AirS.seek evac @23:27:47.50 LyS1.seek 300ul @23:28:02.61 AirS.reconfigure AirSconfig @23:28:02.67 AirS.seek :full @23:28:16.89 LyS1.seek :empty @23:28:46.98 PuckHeater.seek 84C @23:29:47.07 PuckHeater.hold 15:00,84C @23:44:47.50 LyS1.reconfigure LyS1config @23:44:47.56 LyS1.seek 900ul @23:44:55.91 AirS.seek :tVent @23:44:55.99 delay 2 seconds @23:44:58.02 AirS.reconfigure HalfSpeedAirS @23:44:58.09 AirS.seek :evac @23:45:25.82 delay 15 seconds @23:45:40.85 AirS.reconfigure AirSconfig @23:45:40.92 AirS.seek :tVent @23:45:55.18 delay 2 seconds @23:45:57.20 AirS.reconfigure HalfSpeedAirS @23:45:57.25 AirS.seek :evac @23:46:25.00 delay 15 seconds @23:46:40.03 AirS.reconfigure AirSconfig @23:46:40.09 AirS.seek :tVent @23:46:54.29 delay 2 seconds @23:46:56.32 AirS.reconfigure HalfSpeedAirS @23:46:56.37 AirS.seek :evac @23:47:24.10 delay 15 seconds @23:47:39.13 delay 1:00 @23:48:39.15 Handoff.select :waste @23:48:39.25 delay 15 seconds @23:48:54.27 AirS.seek :fVent @23:48:56.46 delay 10 seconds @23:49:06.49 AirS.reconfigure AirSconfig @23:49:06.54 AirS.seek :evac @23:49:07.98 Lysis Recovered in LyS1 @23:49:07.99 Lysis Complete @23:49:08.00 Handoff.select :waste @23:49:08.03 LyS2.seek :full @23:49:08.12 LyS1.reconfigure DAmixLyS1 @23:49:08.17 LyS2.reconfigure DAmixLyS2 @23:49:08.56 LyS2.seek 1480ul @23:49:08.59 LyS1.seek 650ul @23:49:55.96 delay 5 seconds @23:50:00.99 Handoff.select :SPR @23:50:01.10 SPR.command "start 1 14" @23:50:02.10 Running Experiment-Rep #1 @23:50:02.11 delay 10 seconds @23:50:12.13 SPR.command "start 1 0" @23:50:15.97 Waiting up to 4:00 for SPR to enter state 1 @23:52:20.70 SPR.command "hold_on" @23:52:22.41 LyS2.seek 1130ul @23:52:22.45 LyS1.seek 300ul @23:53:28.58 delay 15 seconds @23:53:43.61 SPR.command "hold_off" @23:53:46.38 Waiting up to 25:00 for SPR to enter state 7 @00:13:50.80PDT02-Aug-18 Handoff.select :waste @00:13:50.92 LyS1.reconfigure LyS1config @00:13:50.98 LyS2.reconfigure LyS2config @00:13:51.04 Rep #1 SPR Analysis has Completed @00:13:51.73 Ended log /var/log/esp/spr18aug0123h.spr @00:13:51.75 SPR.command "stats_off" @00:13:53.93 -> Cmd.stop @00:13:54.02 Handoff.select :close @00:13:54.20 Gate.power :heat,:OFF @00:13:54.22 Gate.power :cartridge,:OFF @00:13:54.25 PV.seek :locked @00:13:55.14 PinPort.seek :clear @00:14:00.91 ArS.seek :clear @00:14:01.04 LyS1.seek :clear @00:14:01.17 LyS2.seek :clear @00:14:01.32 AirS.seek :clear @00:14:18.67 ArS.coast @00:14:18.72 LyS1.coast @00:14:18.77 LyS2.coast @00:14:18.82 AirS.coast @00:14:18.87 TV.coast @00:14:18.92 SP.coast @00:14:18.97 SC.coast @00:14:19.02 PV.coast @00:14:19.07 PinPort.coast @00:14:19.26 Gate.power :motor,:OFF @00:14:19.27 Gate.power :main,:OFF @00:14:19.29 Gate.power :core,:OFF @00:14:19.32 Gate.power :analytic1,:OFF @00:14:19.33 Gate.power :analytic2,:OFF @00:14:19.35 Gate.power :analytic3,:OFF @00:14:19.37 Safely stopped and ready to power off