@12:00:51.04PDT03-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @12:00:51.06 >BREAK< ESP3 Gateway v0.99 for cartridge bus @12:00:52.27 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @12:00:53.45 Polling Can every 5:00 @12:00:53.75 Clients may connect on TCP port 9999 @12:00:53.76 Connecting to 10.89.5.2:9999 @12:00:53.80 Waiting for espclients... @12:00:53.87 Session Begun @12:00:55.81 -> showStatus @12:00:57.81 -> Cmd.loadCartridge @12:00:57.94 Gate.power :main,:ON,limit to 5000mA @12:00:57.95 Gate.power :analytic1,:ON,limit to 5000mA @12:00:57.97 Gate.power :analytic2,:ON,limit to 5000mA @12:00:57.99 Gate.power :analytic3,:ON,limit to 5000mA @12:00:58.17 Powering core bus @12:01:00.43 SPR Module 1, FW Rev. B, FPGA Rev. C @12:01:00.52 ArS.configure ArSconfig @12:01:00.62 LyS1.configure LyS1config @12:01:00.74 LyS2.configure LyS2config @12:01:00.83 AirS.configure AirSconfig @12:01:01.01 TV.configure TVconfig @12:01:01.13 SP.configure SPconfig @12:01:01.25 SC.configure SCconfig @12:01:01.37 PV.configure PVconfig @12:01:01.49 PinPort.configure PPconfig @12:01:01.61 Sea.configure SPconfig @12:01:01.67 All elf controllers running firmware version 4.46 @12:01:01.69 Gate.power :motor,:ON,limit to 5000mA @12:01:01.81 ArS.reconfigure ArSconfig @12:01:02.08 ArS.home.jog 0 @12:01:02.27 PinPort.reconfigure PPconfig @12:01:02.31 PV.reconfigure PVconfig @12:01:02.34 TV.reconfigure TVconfig @12:01:02.38 LyS2.reconfigure LyS2config @12:01:02.43 AirS.reconfigure AirSconfig @12:01:02.47 LyS1.reconfigure LyS1config @12:01:02.64 PV.home.jog 0 @12:01:02.71 PinPort.home.jog 0 @12:01:02.74 TV.home.jog 0 @12:01:02.76 AirS.home.jog 0 @12:01:02.79 LyS1.home.jog 0 @12:01:02.82 LyS2.home.jog 0 @12:01:03.18 ArS.reconfigure HomeMagSyringe @12:01:03.40 ArS.jog -289 @12:01:03.44 PinPort.reconfigure HomePP @12:01:03.47 TV.reconfigure HomeTV @12:01:03.52 PV.reconfigure HomePV @12:01:03.67 PinPort.jog -107 @12:01:03.73 TV.jog -546 @12:01:03.76 PV.jog -1505 @12:01:03.93 LyS2.reconfigure HomeSyringe @12:01:03.95 LyS1.reconfigure HomeSyringe @12:01:03.98 AirS.reconfigure HomeMagSyringe @12:01:04.13 LyS2.jog -282 @12:01:04.16 AirS.jog -339 @12:01:04.19 LyS1.jog -282 @12:01:04.35 PinPort.setRawPosition! 0 @12:01:04.37 ArS.setRawPosition! -50 @12:01:04.44 PinPort.seek :home @12:01:04.48 ArS.seek :home @12:01:04.60 PinPort.reconfigure PPconfig @12:01:04.78 LyS2.setRawPosition! -50 @12:01:05.11 LyS2.seek :home @12:01:05.21 AirS.setRawPosition! -50 @12:01:05.24 ArS.reconfigure ArSconfig @12:01:05.27 PV.setRawPosition! -50 @12:01:05.30 LyS1.setRawPosition! -50 @12:01:05.44 PV.seek :home @12:01:05.50 AirS.seek :home @12:01:05.53 LyS1.seek :home @12:01:05.74 LyS2.reconfigure LyS2config @12:01:05.76 TV.setRawPosition! 0 @12:01:05.85 TV.seek :home @12:01:06.02 PV.reconfigure PVconfig @12:01:06.04 TV.reconfigure TVconfig @12:01:06.07 LyS1.reconfigure LyS1config @12:01:06.10 AirS.reconfigure AirSconfig @12:01:06.74 TV.seek :clear @12:01:08.36 TV.coast @12:01:08.41 SC.reconfigure HomeSC @12:01:08.47 SC.home.jog 0 @12:01:09.23 SC.reconfigure SCconfig @12:01:09.29 SC.seek 55 @12:01:09.40 Selecting Cartridge 54 @12:01:09.70 SC.seek 54 @12:01:10.19 LyS2.seek :locked @12:01:10.32 PV.seek :locked @12:01:10.46 AirS.seek :locked @12:01:14.55 Powering cartridge bus @12:01:16.67 Gate.setIR 1750,5000,0,6 @12:01:16.79 Gate.setIR 0,5000,0,6 @12:01:16.85 Loaded Lyse-n-Go Cartridge @12:01:16.86 PuckHeater.configure HeatConfig @12:01:16.91 Gate.power :heat,:ON,limit to 5000mA @12:01:36.59 -> Cmd.startFiltering @12:01:36.82 Duration of filtering limited to 1:05:00 @12:01:37.07 Priming sample loop w/100ml, bypass w/10ml @12:01:37.14 SP.setPosition! 0ml @12:01:37.19 Intake.open @12:01:37.21 Exhaust.open @12:01:38.01 Sea @-42.9psia @12:01:38.03 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @12:01:43.55 Vacuum tare is 23% of full scale @12:01:43.56 PB.open @12:01:43.59 Exhaust.close @12:01:44.63 Sea @-42.9psia @12:01:44.71 SP.reconfigure SPprime @12:01:44.77 SP.seek 10ml,1:21 @12:01:55.66 SP.setPosition! 0ml @12:01:55.71 PB.close @12:01:55.73 Exhaust.open @12:01:56.53 Sea @-42.9psia @12:01:56.61 SP.reconfigure SPprime @12:01:56.68 SP.seek 100ml,8:51 @12:03:55.44 Pressurizing cartridge to 26psi @12:03:55.45 Intake.close @12:03:56.20 SP.setPosition! 0ml @12:03:56.24 PB.open @12:03:57.01 TV.seek :crack @12:03:57.80 TV.seek :clear @12:03:58.60 Intake.open @12:04:00.04 PB.close @12:04:00.75 Exhaust.close @12:04:01.49 Sea @-42.9psia @12:04:01.57 SP.reconfigure SPcharge @12:04:01.64 SP.seek 7.5ml,1:08 @12:04:11.16 Cartridge pressurized with 0.422ml to 26.3psi @12:04:11.54 delay 3 seconds @12:04:14.61 Cartridge at 22.9psi 3 seconds later @12:04:14.69 TV.seek :cartridge @12:04:16.51 TV.seek :clear @12:04:18.33 Sampling 1000.0ml @12:04:18.34 SP.setPosition! 0ml @12:04:18.39 Exhaust.open @12:04:19.14 Sea @-42.9psia @12:04:19.23 SP.reconfigure SPsample @12:04:19.30 SP.seek 1000ml,1:23:53 @12:04:20.25 Cartridge 54 sampling 0/1000ml at 0.17ml/s with 3.9psi vacuum @12:05:20.26 Cartridge 54 sampling 30/1000ml at 0.48ml/s with 24.8psi vacuum @12:06:20.26 Cartridge 54 sampling 61/1000ml at 0.48ml/s with 21.7psi vacuum @12:07:20.26 Cartridge 54 sampling 91/1000ml at 0.52ml/s with 20.5psi vacuum @12:08:20.26 Cartridge 54 sampling 121/1000ml at 0.51ml/s with 22.3psi vacuum @12:09:20.26 Cartridge 54 sampling 150/1000ml at 0.51ml/s with 24.3psi vacuum @12:10:20.26 Cartridge 54 sampling 180/1000ml at 0.51ml/s with 22.0psi vacuum @12:11:20.26 Cartridge 54 sampling 210/1000ml at 0.51ml/s with 24.3psi vacuum @12:12:20.26 Cartridge 54 sampling 239/1000ml at 0.49ml/s with 20.8psi vacuum @12:13:20.26 Cartridge 54 sampling 268/1000ml at 0.52ml/s with 23.2psi vacuum @12:14:20.26 Cartridge 54 sampling 297/1000ml at 0.47ml/s with 17.9psi vacuum @12:15:20.26 Cartridge 54 sampling 326/1000ml at 0.49ml/s with 22.6psi vacuum @12:16:20.26 Cartridge 54 sampling 354/1000ml at 0.46ml/s with 16.8psi vacuum @12:17:20.26 Cartridge 54 sampling 383/1000ml at 0.50ml/s with 21.1psi vacuum @12:18:20.26 Cartridge 54 sampling 411/1000ml at 0.48ml/s with 21.6psi vacuum @12:19:20.26 Cartridge 54 sampling 439/1000ml at 0.48ml/s with 25.6psi vacuum @12:20:20.26 Cartridge 54 sampling 467/1000ml at 0.44ml/s with 26.8psi vacuum @12:21:20.26 Cartridge 54 sampling 496/1000ml at 0.47ml/s with 25.2psi vacuum @12:22:20.28 Cartridge 54 sampling 523/1000ml at 0.48ml/s with 22.6psi vacuum @12:23:20.26 Cartridge 54 sampling 551/1000ml at 0.46ml/s with 16.9psi vacuum @12:24:20.26 Cartridge 54 sampling 580/1000ml at 0.45ml/s with 20.2psi vacuum @12:25:20.26 Cartridge 54 sampling 608/1000ml at 0.49ml/s with 21.7psi vacuum @12:26:20.26 Cartridge 54 sampling 636/1000ml at 0.46ml/s with 18.4psi vacuum @12:27:20.26 Cartridge 54 sampling 664/1000ml at 0.48ml/s with 24.7psi vacuum @12:28:20.26 Cartridge 54 sampling 692/1000ml at 0.44ml/s with 22.3psi vacuum @12:29:20.26 Cartridge 54 sampling 720/1000ml at 0.48ml/s with 22.7psi vacuum @12:30:20.26 Cartridge 54 sampling 748/1000ml at 0.50ml/s with 23.4psi vacuum @12:31:20.26 Cartridge 54 sampling 775/1000ml at 0.49ml/s with 21.1psi vacuum @12:32:20.26 Cartridge 54 sampling 803/1000ml at 0.47ml/s with 18.1psi vacuum @12:33:20.26 Cartridge 54 sampling 831/1000ml at 0.42ml/s with 23.5psi vacuum @12:34:20.26 Cartridge 54 sampling 858/1000ml at 0.46ml/s with 17.8psi vacuum @12:35:20.26 Cartridge 54 sampling 886/1000ml at 0.48ml/s with 22.2psi vacuum @12:36:20.26 Cartridge 54 sampling 913/1000ml at 0.49ml/s with 21.3psi vacuum @12:37:20.26 Cartridge 54 sampling 941/1000ml at 0.45ml/s with 16.7psi vacuum @12:38:20.26 Cartridge 54 sampling 968/1000ml at 0.42ml/s with 20.4psi vacuum @12:39:20.26 Cartridge 54 sampling 995/1000ml at 0.46ml/s with 19.9psi vacuum @12:39:36.10 Intake.close @12:39:36.13 Exhaust.close @12:39:36.90 Sampled 1000.0ml @12:39:36.98 TV.seek :bypass @12:39:38.59 TV.seek :clear @12:39:41.16 -> Cmd.startProcessing @12:39:42.96 SPR.command "read_sequences" @12:39:43.29 SPR.command "stats_on" @12:39:43.33 SPR.command "start 2 0" @12:39:45.34 Begun log /var/log/esp/spr18aug0312h.spr @12:39:46.14 Handoff.select :waste @12:39:46.27 ArS.seek empty @12:40:03.99 PinPort.seek :cartridge @12:40:09.71 LyS1.seek 1350ul @12:40:15.65 PV.seek :reagent @12:40:16.49 AirS.seek :tVent @12:40:18.55 delay 2 seconds @12:40:20.58 AirS.reconfigure EvacAirS @12:40:20.64 AirS.seek :evac @12:40:42.96 delay 15 seconds @12:40:57.99 AirS.reconfigure AirSconfig @12:40:58.04 AirS.seek :tVent @12:41:12.26 delay 2 seconds @12:41:14.29 AirS.reconfigure EvacAirS @12:41:14.63 AirS.seek :evac @12:41:36.94 delay 15 seconds @12:41:51.97 AirS.reconfigure AirSconfig @12:41:52.03 AirS.seek :tVent @12:42:06.24 delay 2 seconds @12:42:08.27 AirS.reconfigure EvacAirS @12:42:08.33 AirS.seek :evac @12:42:30.64 delay 15 seconds @12:42:45.67 AirS.reconfigure AirSconfig @12:42:45.72 AirS.seek :tVent @12:42:59.95 delay 2 seconds @12:43:01.98 AirS.reconfigure EvacAirS @12:43:02.04 AirS.seek :evac @12:43:24.35 delay 15 seconds @12:43:39.38 AirS.reconfigure AirSconfig @12:43:39.44 AirS.seek :tVent @12:43:53.65 delay 2 seconds @12:43:55.68 AirS.reconfigure EvacAirS @12:43:55.75 AirS.seek :evac @12:44:18.06 delay 15 seconds @12:44:33.08 delay 1:30 @12:46:03.11 AirS.reconfigure AirSconfig @12:46:03.16 AirS.seek :fVent @12:46:04.60 delay 15 seconds @12:46:19.62 LyS1.reconfigure SlowLyS1 @12:46:19.72 LyS1.seek 1050ul @12:46:49.77 delay 5 seconds @12:46:54.79 Handoff.select :blocked @12:46:54.95 LyS1.seek 450ul @12:47:54.97 delay 10 seconds @12:48:04.99 AirS.reconfigure SlowAirS @12:48:05.11 AirS.reconfigure to mix into 1.37806 parts LyS1 @12:48:05.45 AirS.seek evac @12:48:05.50 LyS1.seek 300ul @12:48:20.61 AirS.reconfigure AirSconfig @12:48:20.67 AirS.seek :full @12:48:34.88 LyS1.seek :empty @12:49:04.97 PuckHeater.seek 86.4C @12:50:30.47 PuckHeater.hold 15:00,86.4C @13:05:31.13 LyS1.reconfigure LyS1config @13:05:31.20 LyS1.seek 900ul @13:05:39.54 AirS.seek :tVent @13:05:39.62 delay 2 seconds @13:05:41.65 AirS.reconfigure HalfSpeedAirS @13:05:41.70 AirS.seek :evac @13:06:09.43 delay 15 seconds @13:06:24.46 AirS.reconfigure AirSconfig @13:06:24.52 AirS.seek :tVent @13:06:38.72 delay 2 seconds @13:06:40.75 AirS.reconfigure HalfSpeedAirS @13:06:40.80 AirS.seek :evac @13:07:08.53 delay 15 seconds @13:07:23.57 AirS.reconfigure AirSconfig @13:07:23.63 AirS.seek :tVent @13:07:37.84 delay 2 seconds @13:07:39.88 AirS.reconfigure HalfSpeedAirS @13:07:39.93 AirS.seek :evac @13:08:07.67 delay 15 seconds @13:08:22.69 delay 1:00 @13:09:22.71 Handoff.select :waste @13:09:22.82 delay 15 seconds @13:09:37.85 AirS.seek :fVent @13:09:40.04 delay 10 seconds @13:09:50.07 AirS.reconfigure AirSconfig @13:09:50.12 AirS.seek :evac @13:09:51.56 Lysis Recovered in LyS1 @13:09:51.57 Lysis Complete @13:09:51.58 Handoff.select :waste @13:09:51.61 LyS2.seek :full @13:09:51.70 LyS1.reconfigure DAmixLyS1 @13:09:51.75 LyS2.reconfigure DAmixLyS2 @13:09:52.19 LyS2.seek 1480ul @13:09:52.22 LyS1.seek 650ul @13:10:39.55 delay 5 seconds @13:10:44.56 Handoff.select :SPR @13:10:44.67 SPR.command "start 1 14" @13:10:45.63 Running Experiment-Rep #1 @13:10:45.64 delay 10 seconds @13:10:55.66 SPR.command "start 1 0" @13:10:59.00 Waiting up to 4:00 for SPR to enter state 1 @13:13:03.24 SPR.command "hold_on" @13:13:05.46 LyS2.seek 1130ul @13:13:05.49 LyS1.seek 300ul @13:14:11.70 delay 15 seconds @13:14:26.72 SPR.command "hold_off" @13:14:29.92 Waiting up to 25:00 for SPR to enter state 7 @13:34:33.35 Handoff.select :waste @13:34:33.48 LyS1.reconfigure LyS1config @13:34:33.54 LyS2.reconfigure LyS2config @13:34:33.60 Rep #1 SPR Analysis has Completed @13:34:34.28 Ended log /var/log/esp/spr18aug0312h.spr @13:34:34.30 SPR.command "stats_off" @13:34:36.33 -> Cmd.stop @13:34:36.42 Handoff.select :close @13:34:36.59 Gate.power :heat,:OFF @13:34:36.61 Gate.power :cartridge,:OFF @13:34:36.64 PV.seek :locked @13:34:37.53 PinPort.seek :clear @13:34:43.30 ArS.seek :clear @13:34:43.43 LyS1.seek :clear @13:34:43.56 LyS2.seek :clear @13:34:43.69 AirS.seek :clear @13:35:01.06 ArS.coast @13:35:01.11 LyS1.coast @13:35:01.16 LyS2.coast @13:35:01.21 AirS.coast @13:35:01.26 TV.coast @13:35:01.31 SP.coast @13:35:01.36 SC.coast @13:35:01.41 PV.coast @13:35:01.46 PinPort.coast @13:35:01.64 Gate.power :motor,:OFF @13:35:01.66 Gate.power :main,:OFF @13:35:01.68 Gate.power :core,:OFF @13:35:01.70 Gate.power :analytic1,:OFF @13:35:01.72 Gate.power :analytic2,:OFF @13:35:01.74 Gate.power :analytic3,:OFF @13:35:01.76 Safely stopped and ready to power off