@01:12:54.14PDT04-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @01:12:54.16 >BREAK< ESP3 Gateway v0.99 for cartridge bus @01:12:55.35 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @01:12:56.51 Polling Can every 5:00 @01:12:56.81 Clients may connect on TCP port 9999 @01:12:56.82 Connecting to 10.89.5.2:9999 @01:12:56.86 Waiting for espclients... @01:12:57.22 Session Begun @01:12:59.19 -> showStatus @01:13:01.26 -> Cmd.loadCartridge @01:13:01.39 Gate.power :main,:ON,limit to 5000mA @01:13:01.40 Gate.power :analytic1,:ON,limit to 5000mA @01:13:01.42 Gate.power :analytic2,:ON,limit to 5000mA @01:13:01.44 Gate.power :analytic3,:ON,limit to 5000mA @01:13:01.58 Powering core bus @01:13:03.89 SPR Module 1, FW Rev. B, FPGA Rev. C @01:13:03.99 ArS.configure ArSconfig @01:13:04.10 LyS1.configure LyS1config @01:13:04.21 LyS2.configure LyS2config @01:13:04.31 AirS.configure AirSconfig @01:13:04.43 TV.configure TVconfig @01:13:04.56 SP.configure SPconfig @01:13:04.68 SC.configure SCconfig @01:13:04.80 PV.configure PVconfig @01:13:04.92 PinPort.configure PPconfig @01:13:05.04 Sea.configure SPconfig @01:13:05.10 All elf controllers running firmware version 4.46 @01:13:05.12 Gate.power :motor,:ON,limit to 5000mA @01:13:05.29 ArS.reconfigure ArSconfig @01:13:05.54 ArS.home.jog 0 @01:13:05.69 PV.reconfigure PVconfig @01:13:05.76 TV.reconfigure TVconfig @01:13:05.79 LyS2.reconfigure LyS2config @01:13:05.86 PinPort.reconfigure PPconfig @01:13:05.97 AirS.reconfigure AirSconfig @01:13:06.00 LyS1.reconfigure LyS1config @01:13:06.18 PV.home.jog 0 @01:13:06.23 TV.home.jog 0 @01:13:06.25 LyS2.home.jog 0 @01:13:06.28 PinPort.home.jog 0 @01:13:06.31 AirS.home.jog 0 @01:13:06.37 LyS1.home.jog 0 @01:13:06.84 ArS.reconfigure HomeMagSyringe @01:13:07.05 LyS2.reconfigure HomeSyringe @01:13:07.07 LyS1.reconfigure HomeSyringe @01:13:07.10 PV.reconfigure HomePV @01:13:07.14 TV.reconfigure HomeTV @01:13:07.17 AirS.reconfigure HomeMagSyringe @01:13:07.20 ArS.jog -288 @01:13:07.25 PinPort.reconfigure HomePP @01:13:07.46 LyS1.jog -282 @01:13:07.50 LyS2.jog -273 @01:13:07.52 PV.jog -1506 @01:13:07.56 AirS.jog -340 @01:13:07.60 TV.jog -550 @01:13:07.62 PinPort.jog -108 @01:13:07.93 ArS.setRawPosition! -50 @01:13:07.98 ArS.seek :home @01:13:08.10 PinPort.setRawPosition! 0 @01:13:08.15 PinPort.seek :home @01:13:08.49 LyS2.setRawPosition! -50 @01:13:08.56 LyS1.setRawPosition! -50 @01:13:08.58 PinPort.reconfigure PPconfig @01:13:08.61 ArS.reconfigure ArSconfig @01:13:08.77 LyS2.seek :home @01:13:08.80 LyS1.seek :home @01:13:08.97 PV.setRawPosition! -50 @01:13:08.98 AirS.setRawPosition! -50 @01:13:09.06 PV.seek :home @01:13:09.09 AirS.seek :home @01:13:09.27 LyS2.reconfigure LyS2config @01:13:09.30 LyS1.reconfigure LyS1config @01:13:09.45 PV.reconfigure PVconfig @01:13:09.53 AirS.reconfigure AirSconfig @01:13:09.65 TV.setRawPosition! 0 @01:13:09.70 TV.seek :home @01:13:09.79 TV.reconfigure TVconfig @01:13:10.05 TV.seek :clear @01:13:11.68 TV.coast @01:13:11.73 SC.reconfigure HomeSC @01:13:11.79 SC.home.jog 0 @01:13:12.55 SC.reconfigure SCconfig @01:13:12.61 SC.seek 51 @01:13:12.68 Selecting Cartridge 50 @01:13:12.98 SC.seek 50 @01:13:13.48 LyS2.seek :locked @01:13:13.61 PV.seek :locked @01:13:13.74 AirS.seek :locked @01:13:17.82 Powering cartridge bus @01:13:19.94 Gate.setIR 1750,5000,0,6 @01:13:20.06 Gate.setIR 0,5000,0,6 @01:13:20.12 Loaded Lyse-n-Go Cartridge @01:13:20.13 PuckHeater.configure HeatConfig @01:13:20.18 Gate.power :heat,:ON,limit to 5000mA @01:13:40.04 -> Cmd.startFiltering @01:13:40.27 Duration of filtering limited to 1:05:00 @01:13:40.52 Priming sample loop w/100ml, bypass w/10ml @01:13:40.60 SP.setPosition! 0ml @01:13:40.64 Intake.open @01:13:40.66 Exhaust.open @01:13:41.49 Sea @-42.9psia @01:13:41.51 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @01:13:47.04 Vacuum tare is 22% of full scale @01:13:47.05 PB.open @01:13:47.10 Exhaust.close @01:13:48.15 Sea @-42.9psia @01:13:48.24 SP.reconfigure SPprime @01:13:48.30 SP.seek 10ml,1:21 @01:13:59.19 SP.setPosition! 0ml @01:13:59.24 PB.close @01:13:59.26 Exhaust.open @01:14:00.09 Sea @-42.9psia @01:14:00.18 SP.reconfigure SPprime @01:14:00.24 SP.seek 100ml,8:51 @01:15:55.93 Pressurizing cartridge to 26psi @01:15:55.94 Intake.close @01:15:56.70 SP.setPosition! 0ml @01:15:56.74 PB.open @01:15:57.53 TV.seek :crack @01:15:58.32 TV.seek :clear @01:15:59.11 Intake.open @01:16:00.53 PB.close @01:16:01.27 Exhaust.close @01:16:02.01 Sea @-42.9psia @01:16:02.10 SP.reconfigure SPcharge @01:16:02.16 SP.seek 7.5ml,1:08 @01:16:12.77 Cartridge pressurized with 0.526ml to 26.3psi @01:16:13.15 delay 3 seconds @01:16:16.22 Cartridge at 19.8psi 3 seconds later @01:16:16.30 TV.seek :cartridge @01:16:18.13 TV.seek :clear @01:16:19.94 Sampling 1000.0ml @01:16:19.96 SP.setPosition! 0ml @01:16:20.01 Exhaust.open @01:16:20.75 Sea @-42.9psia @01:16:20.85 SP.reconfigure SPsample @01:16:20.91 SP.seek 1000ml,1:23:53 @01:16:21.86 Cartridge 50 sampling 0/1000ml at 0.17ml/s with 4.5psi vacuum @01:17:21.87 Cartridge 50 sampling 31/1000ml at 0.54ml/s with 25.4psi vacuum @01:18:21.87 Cartridge 50 sampling 62/1000ml at 0.49ml/s with 22.7psi vacuum @01:19:21.87 Cartridge 50 sampling 93/1000ml at 0.53ml/s with 24.9psi vacuum @01:20:21.88 Cartridge 50 sampling 124/1000ml at 0.51ml/s with 25.9psi vacuum @01:21:21.87 Cartridge 50 sampling 154/1000ml at 0.49ml/s with 17.2psi vacuum @01:22:21.87 Cartridge 50 sampling 184/1000ml at 0.52ml/s with 24.2psi vacuum @01:23:21.87 Cartridge 50 sampling 214/1000ml at 0.49ml/s with 19.0psi vacuum @01:24:21.87 Cartridge 50 sampling 244/1000ml at 0.47ml/s with 22.2psi vacuum @01:25:21.87 Cartridge 50 sampling 273/1000ml at 0.48ml/s with 19.2psi vacuum @01:26:21.87 Cartridge 50 sampling 302/1000ml at 0.46ml/s with 21.6psi vacuum @01:27:21.87 Cartridge 50 sampling 331/1000ml at 0.48ml/s with 18.7psi vacuum @01:28:21.87 Cartridge 50 sampling 359/1000ml at 0.47ml/s with 25.1psi vacuum @01:29:21.87 Cartridge 50 sampling 388/1000ml at 0.44ml/s with 22.1psi vacuum @01:30:21.87 Cartridge 50 sampling 416/1000ml at 0.47ml/s with 18.2psi vacuum @01:31:21.87 Cartridge 50 sampling 444/1000ml at 0.47ml/s with 24.8psi vacuum @01:32:21.87 Cartridge 50 sampling 471/1000ml at 0.46ml/s with 25.2psi vacuum @01:33:22.14 Cartridge 50 sampling 499/1000ml at 0.48ml/s with 26.1psi vacuum @01:34:21.88 Cartridge 50 sampling 526/1000ml at 0.45ml/s with 17.9psi vacuum @01:35:21.88 Cartridge 50 sampling 553/1000ml at 0.47ml/s with 25.8psi vacuum @01:36:21.88 Cartridge 50 sampling 579/1000ml at 0.45ml/s with 18.1psi vacuum @01:37:21.88 Cartridge 50 sampling 606/1000ml at 0.46ml/s with 23.7psi vacuum @01:38:21.88 Cartridge 50 sampling 632/1000ml at 0.40ml/s with 21.2psi vacuum @01:39:21.87 Cartridge 50 sampling 658/1000ml at 0.40ml/s with 26.5psi vacuum @01:40:21.88 Cartridge 50 sampling 684/1000ml at 0.44ml/s with 18.3psi vacuum @01:41:21.87 Cartridge 50 sampling 710/1000ml at 0.39ml/s with 22.8psi vacuum @01:42:21.88 Cartridge 50 sampling 736/1000ml at 0.39ml/s with 19.6psi vacuum @01:43:21.88 Cartridge 50 sampling 761/1000ml at 0.45ml/s with 22.4psi vacuum @01:44:21.87 Cartridge 50 sampling 786/1000ml at 0.43ml/s with 18.4psi vacuum @01:45:21.87 Cartridge 50 sampling 811/1000ml at 0.43ml/s with 25.2psi vacuum @01:46:21.87 Cartridge 50 sampling 836/1000ml at 0.44ml/s with 23.6psi vacuum @01:47:21.94 Cartridge 50 sampling 861/1000ml at 0.42ml/s with 24.3psi vacuum @01:48:21.87 Cartridge 50 sampling 885/1000ml at 0.40ml/s with 16.3psi vacuum @01:49:21.87 Cartridge 50 sampling 909/1000ml at 0.37ml/s with 19.8psi vacuum @01:50:21.87 Cartridge 50 sampling 933/1000ml at 0.39ml/s with 19.2psi vacuum @01:51:21.87 Cartridge 50 sampling 957/1000ml at 0.42ml/s with 23.9psi vacuum @01:52:21.87 Cartridge 50 sampling 980/1000ml at 0.39ml/s with 24.1psi vacuum @01:53:16.49 Intake.close @01:53:16.52 Exhaust.close @01:53:17.30 Sampled 1000.0ml @01:53:17.39 TV.seek :bypass @01:53:19.01 TV.seek :clear @01:53:21.22 -> Cmd.startProcessing @01:53:23.00 SPR.command "read_sequences" @01:53:23.21 SPR.command "stats_on" @01:53:23.25 SPR.command "start 2 0" @01:53:25.26 Begun log /var/log/esp/spr18aug0401h.spr @01:53:26.06 Handoff.select :waste @01:53:26.18 ArS.seek empty @01:53:43.91 PinPort.seek :cartridge @01:53:49.62 LyS1.seek 1350ul @01:53:55.56 PV.seek :reagent @01:53:56.39 AirS.seek :tVent @01:53:58.45 delay 2 seconds @01:54:00.48 AirS.reconfigure EvacAirS @01:54:00.55 AirS.seek :evac @01:54:22.86 delay 15 seconds @01:54:37.89 AirS.reconfigure AirSconfig @01:54:37.95 AirS.seek :tVent @01:54:52.41 delay 2 seconds @01:54:54.44 AirS.reconfigure EvacAirS @01:54:54.51 AirS.seek :evac @01:55:16.81 delay 15 seconds @01:55:31.84 AirS.reconfigure AirSconfig @01:55:31.90 AirS.seek :tVent @01:55:46.11 delay 2 seconds @01:55:48.14 AirS.reconfigure EvacAirS @01:55:48.20 AirS.seek :evac @01:56:10.49 delay 15 seconds @01:56:25.52 AirS.reconfigure AirSconfig @01:56:25.58 AirS.seek :tVent @01:56:39.79 delay 2 seconds @01:56:41.82 AirS.reconfigure EvacAirS @01:56:41.87 AirS.seek :evac @01:57:04.16 delay 15 seconds @01:57:19.19 AirS.reconfigure AirSconfig @01:57:19.26 AirS.seek :tVent @01:57:33.46 delay 2 seconds @01:57:35.49 AirS.reconfigure EvacAirS @01:57:35.54 AirS.seek :evac @01:57:57.85 delay 15 seconds @01:58:12.88 delay 1:30 @01:59:42.90 AirS.reconfigure AirSconfig @01:59:42.96 AirS.seek :fVent @01:59:44.40 delay 15 seconds @01:59:59.43 LyS1.reconfigure SlowLyS1 @01:59:59.53 LyS1.seek 1050ul @02:00:29.56 delay 5 seconds @02:00:34.58 Handoff.select :blocked @02:00:34.80 LyS1.seek 450ul @02:01:34.76 delay 10 seconds @02:01:44.79 AirS.reconfigure SlowAirS @02:01:44.89 AirS.reconfigure to mix into 1.37806 parts LyS1 @02:01:45.25 AirS.seek evac @02:01:45.29 LyS1.seek 300ul @02:02:00.39 AirS.reconfigure AirSconfig @02:02:00.45 AirS.seek :full @02:02:14.67 LyS1.seek :empty @02:02:44.75 PuckHeater.seek 86.3C @02:03:51.42 PuckHeater.hold 15:00,86.3C @02:18:49.98 LyS1.reconfigure LyS1config @02:18:50.05 LyS1.seek 900ul @02:18:58.38 AirS.seek :tVent @02:18:58.46 delay 2 seconds @02:19:00.48 AirS.reconfigure HalfSpeedAirS @02:19:00.53 AirS.seek :evac @02:19:28.34 delay 15 seconds @02:19:43.37 AirS.reconfigure AirSconfig @02:19:43.43 AirS.seek :tVent @02:19:57.64 delay 2 seconds @02:19:59.67 AirS.reconfigure HalfSpeedAirS @02:19:59.72 AirS.seek :evac @02:20:27.48 delay 15 seconds @02:20:42.50 AirS.reconfigure AirSconfig @02:20:42.56 AirS.seek :tVent @02:20:56.77 delay 2 seconds @02:20:58.80 AirS.reconfigure HalfSpeedAirS @02:20:58.86 AirS.seek :evac @02:21:26.62 delay 15 seconds @02:21:41.65 delay 1:00 @02:22:41.66 Handoff.select :waste @02:22:41.77 delay 15 seconds @02:22:56.79 AirS.seek :fVent @02:22:58.99 delay 10 seconds @02:23:09.02 AirS.reconfigure AirSconfig @02:23:09.07 AirS.seek :evac @02:23:10.51 Lysis Recovered in LyS1 @02:23:10.52 Lysis Complete @02:23:10.54 Handoff.select :waste @02:23:10.56 LyS2.seek :full @02:23:10.65 LyS1.reconfigure DAmixLyS1 @02:23:10.70 LyS2.reconfigure DAmixLyS2 @02:23:11.09 LyS2.seek 1480ul @02:23:11.13 LyS1.seek 650ul @02:23:58.48 delay 5 seconds @02:24:03.49 Handoff.select :SPR @02:24:03.60 SPR.command "start 1 14" @02:24:04.74 Running Experiment-Rep #1 @02:24:04.75 delay 10 seconds @02:24:14.77 SPR.command "start 1 0" @02:24:18.11 Waiting up to 4:00 for SPR to enter state 1 @02:26:22.36 SPR.command "hold_on" @02:26:24.11 LyS2.seek 1130ul @02:26:24.13 LyS1.seek 300ul @02:27:30.33 delay 15 seconds @02:27:45.34 SPR.command "hold_off" @02:27:48.08 Waiting up to 25:00 for SPR to enter state 7 @02:47:52.46 Handoff.select :waste @02:47:52.59 LyS1.reconfigure LyS1config @02:47:52.65 LyS2.reconfigure LyS2config @02:47:52.71 Rep #1 SPR Analysis has Completed @02:47:53.40 Ended log /var/log/esp/spr18aug0401h.spr @02:47:53.65 SPR.command "stats_off" @02:47:55.71 -> Cmd.stop @02:47:55.81 Handoff.select :close @02:47:55.98 Gate.power :heat,:OFF @02:47:56.00 Gate.power :cartridge,:OFF @02:47:56.02 PV.seek :locked @02:47:56.92 PinPort.seek :clear @02:48:02.70 ArS.seek :clear @02:48:02.82 LyS1.seek :clear @02:48:02.96 LyS2.seek :clear @02:48:03.09 AirS.seek :clear @02:48:20.46 ArS.coast @02:48:20.51 LyS1.coast @02:48:20.56 LyS2.coast @02:48:20.61 AirS.coast @02:48:20.66 TV.coast @02:48:20.71 SP.coast @02:48:20.76 SC.coast @02:48:20.81 PV.coast @02:48:20.87 PinPort.coast @02:48:21.04 Gate.power :motor,:OFF @02:48:21.06 Gate.power :main,:OFF @02:48:21.08 Gate.power :core,:OFF @02:48:21.10 Gate.power :analytic1,:OFF @02:48:21.13 Gate.power :analytic2,:OFF @02:48:21.14 Gate.power :analytic3,:OFF @02:48:21.16 Safely stopped and ready to power off