@11:19:12.60PDT04-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @11:19:12.62 >BREAK< ESP3 Gateway v0.99 for cartridge bus @11:19:13.86 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @11:19:15.05 Polling Can every 5:00 @11:19:15.35 Clients may connect on TCP port 9999 @11:19:15.36 Connecting to 10.89.5.2:9999 @11:19:15.40 Waiting for espclients... @11:19:15.47 Session Begun @11:19:17.45 -> showStatus @11:19:19.46 -> Cmd.loadCartridge @11:19:19.58 Gate.power :main,:ON,limit to 5000mA @11:19:19.60 Gate.power :analytic1,:ON,limit to 5000mA @11:19:19.62 Gate.power :analytic2,:ON,limit to 5000mA @11:19:19.64 Gate.power :analytic3,:ON,limit to 5000mA @11:19:19.79 Powering core bus @11:19:22.08 SPR Module 1, FW Rev. B, FPGA Rev. C @11:19:22.18 ArS.configure ArSconfig @11:19:22.28 LyS1.configure LyS1config @11:19:22.40 LyS2.configure LyS2config @11:19:22.51 AirS.configure AirSconfig @11:19:22.63 TV.configure TVconfig @11:19:22.75 SP.configure SPconfig @11:19:22.87 SC.configure SCconfig @11:19:22.99 PV.configure PVconfig @11:19:23.11 PinPort.configure PPconfig @11:19:23.23 Sea.configure SPconfig @11:19:23.29 All elf controllers running firmware version 4.46 @11:19:23.31 Gate.power :motor,:ON,limit to 5000mA @11:19:23.81 PV.reconfigure PVconfig @11:19:23.87 TV.reconfigure TVconfig @11:19:23.90 LyS2.reconfigure LyS2config @11:19:23.94 ArS.reconfigure ArSconfig @11:19:23.97 PinPort.reconfigure PPconfig @11:19:24.02 AirS.reconfigure AirSconfig @11:19:24.05 LyS1.reconfigure LyS1config @11:19:24.24 PV.home.jog 0 @11:19:24.29 TV.home.jog 0 @11:19:24.31 ArS.home.jog 0 @11:19:24.34 LyS2.home.jog 0 @11:19:24.37 AirS.home.jog 0 @11:19:24.41 LyS1.home.jog 0 @11:19:24.46 PinPort.home.jog 0 @11:19:25.14 LyS2.reconfigure HomeSyringe @11:19:25.19 PinPort.reconfigure HomePP @11:19:25.24 TV.reconfigure HomeTV @11:19:25.27 AirS.reconfigure HomeMagSyringe @11:19:25.31 ArS.reconfigure HomeMagSyringe @11:19:25.34 PV.reconfigure HomePV @11:19:25.54 LyS2.jog -277 @11:19:25.58 TV.jog -554 @11:19:25.62 PinPort.jog -107 @11:19:25.65 PV.jog -1505 @11:19:25.68 ArS.jog -290 @11:19:25.71 AirS.jog -340 @11:19:25.94 LyS1.reconfigure HomeSyringe @11:19:26.00 LyS1.jog -285 @11:19:26.11 PinPort.setRawPosition! 0 @11:19:26.16 PinPort.seek :home @11:19:26.24 PinPort.reconfigure PPconfig @11:19:26.33 LyS2.setRawPosition! -50 @11:19:26.38 LyS2.seek :home @11:19:26.72 AirS.setRawPosition! -50 @11:19:26.74 ArS.setRawPosition! -50 @11:19:26.76 LyS1.setRawPosition! -50 @11:19:26.85 AirS.seek :home @11:19:26.90 ArS.seek :home @11:19:26.97 LyS1.seek :home @11:19:27.17 PV.setRawPosition! -50 @11:19:27.19 LyS2.reconfigure LyS2config @11:19:27.28 PV.seek :home @11:19:27.40 AirS.reconfigure AirSconfig @11:19:27.43 LyS1.reconfigure LyS1config @11:19:27.46 ArS.reconfigure ArSconfig @11:19:27.68 TV.setRawPosition! 0 @11:19:27.70 PV.reconfigure PVconfig @11:19:27.79 TV.seek :home @11:19:27.89 TV.reconfigure TVconfig @11:19:28.12 TV.seek :clear @11:19:29.75 TV.coast @11:19:29.80 SC.reconfigure HomeSC @11:19:29.87 SC.home.jog 0 @11:19:30.63 SC.reconfigure SCconfig @11:19:30.69 SC.seek 47 @11:19:30.78 Selecting Cartridge 46 @11:19:31.09 SC.seek 46 @11:19:31.58 LyS2.seek :locked @11:19:31.71 PV.seek :locked @11:19:31.84 AirS.seek :locked @11:19:35.92 Powering cartridge bus @11:19:38.05 Gate.setIR 1750,5000,0,6 @11:19:38.17 Gate.setIR 0,5000,0,6 @11:19:38.22 Loaded Lyse-n-Go Cartridge @11:19:38.23 PuckHeater.configure HeatConfig @11:19:38.29 Gate.power :heat,:ON,limit to 5000mA @11:19:58.17 -> Cmd.startFiltering @11:19:58.40 Duration of filtering limited to 1:05:00 @11:19:58.65 Priming sample loop w/100ml, bypass w/10ml @11:19:58.72 SP.setPosition! 0ml @11:19:58.76 Intake.open @11:19:58.81 Exhaust.open @11:19:59.57 Sea @-42.9psia @11:19:59.58 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @11:20:05.35 Vacuum tare is 23% of full scale @11:20:05.37 PB.open @11:20:05.40 Exhaust.close @11:20:06.22 Sea @-42.9psia @11:20:06.31 SP.reconfigure SPprime @11:20:06.37 SP.seek 10ml,1:21 @11:20:17.25 SP.setPosition! 0ml @11:20:17.29 PB.close @11:20:17.32 Exhaust.open @11:20:18.11 Sea @-42.9psia @11:20:18.19 SP.reconfigure SPprime @11:20:18.26 SP.seek 100ml,8:51 @11:22:12.40 Pressurizing cartridge to 26psi @11:22:12.41 Intake.close @11:22:13.11 SP.setPosition! 0ml @11:22:13.15 PB.open @11:22:13.89 TV.seek :crack @11:22:14.68 TV.seek :clear @11:22:15.48 Intake.open @11:22:16.92 PB.close @11:22:17.64 Exhaust.close @11:22:18.41 Sea @-42.9psia @11:22:18.49 SP.reconfigure SPcharge @11:22:18.55 SP.seek 7.5ml,1:08 @11:22:28.97 Cartridge pressurized with 0.506ml to 26.3psi @11:22:29.20 delay 3 seconds @11:22:32.27 Cartridge at 22.0psi 3 seconds later @11:22:32.35 TV.seek :cartridge @11:22:34.17 TV.seek :clear @11:22:35.99 Sampling 1000.0ml @11:22:36.00 SP.setPosition! 0ml @11:22:36.05 Exhaust.open @11:22:36.82 Sea @-42.9psia @11:22:36.91 SP.reconfigure SPsample @11:22:36.97 SP.seek 1000ml,1:23:53 @11:22:37.93 Cartridge 46 sampling 0/1000ml at 0.17ml/s with 4.6psi vacuum @11:23:37.94 Cartridge 46 sampling 32/1000ml at 0.55ml/s with 22.5psi vacuum @11:24:37.93 Cartridge 46 sampling 63/1000ml at 0.54ml/s with 24.0psi vacuum @11:25:37.94 Cartridge 46 sampling 95/1000ml at 0.50ml/s with 26.0psi vacuum @11:26:37.94 Cartridge 46 sampling 126/1000ml at 0.49ml/s with 23.5psi vacuum @11:27:37.94 Cartridge 46 sampling 156/1000ml at 0.48ml/s with 21.6psi vacuum @11:28:37.94 Cartridge 46 sampling 187/1000ml at 0.48ml/s with 28.0psi vacuum @11:29:37.93 Cartridge 46 sampling 216/1000ml at 0.53ml/s with 24.0psi vacuum @11:30:37.94 Cartridge 46 sampling 246/1000ml at 0.46ml/s with 22.6psi vacuum @11:31:37.94 Cartridge 46 sampling 275/1000ml at 0.51ml/s with 21.2psi vacuum @11:32:37.94 Cartridge 46 sampling 304/1000ml at 0.49ml/s with 24.1psi vacuum @11:33:37.94 Cartridge 46 sampling 332/1000ml at 0.50ml/s with 22.9psi vacuum @11:34:37.93 Cartridge 46 sampling 360/1000ml at 0.43ml/s with 21.9psi vacuum @11:35:37.94 Cartridge 46 sampling 388/1000ml at 0.43ml/s with 20.6psi vacuum @11:36:37.94 Cartridge 46 sampling 415/1000ml at 0.44ml/s with 25.5psi vacuum @11:37:37.94 Cartridge 46 sampling 441/1000ml at 0.43ml/s with 17.5psi vacuum @11:38:37.94 Cartridge 46 sampling 467/1000ml at 0.42ml/s with 17.5psi vacuum @11:39:38.19 Cartridge 46 sampling 493/1000ml at 0.40ml/s with 22.5psi vacuum @11:40:37.94 Cartridge 46 sampling 518/1000ml at 0.43ml/s with 25.9psi vacuum @11:41:37.95 Cartridge 46 sampling 543/1000ml at 0.38ml/s with 21.0psi vacuum @11:42:37.95 Cartridge 46 sampling 567/1000ml at 0.37ml/s with 26.8psi vacuum @11:43:37.94 Cartridge 46 sampling 591/1000ml at 0.36ml/s with 25.3psi vacuum @11:44:37.93 Cartridge 46 sampling 614/1000ml at 0.37ml/s with 19.1psi vacuum @11:45:37.94 Cartridge 46 sampling 637/1000ml at 0.35ml/s with 26.5psi vacuum @11:46:37.94 Cartridge 46 sampling 659/1000ml at 0.33ml/s with 25.4psi vacuum @11:47:37.94 Cartridge 46 sampling 680/1000ml at 0.39ml/s with 22.7psi vacuum @11:48:37.94 Cartridge 46 sampling 701/1000ml at 0.37ml/s with 25.9psi vacuum @11:49:37.94 Cartridge 46 sampling 722/1000ml at 0.36ml/s with 20.3psi vacuum @11:50:37.94 Cartridge 46 sampling 742/1000ml at 0.34ml/s with 19.3psi vacuum @11:51:37.94 Cartridge 46 sampling 761/1000ml at 0.33ml/s with 19.3psi vacuum @11:52:37.94 Cartridge 46 sampling 780/1000ml at 0.34ml/s with 25.9psi vacuum @11:53:37.94 Cartridge 46 sampling 799/1000ml at 0.35ml/s with 24.1psi vacuum @11:54:37.94 Cartridge 46 sampling 817/1000ml at 0.27ml/s with 25.2psi vacuum @11:55:37.94 Cartridge 46 sampling 834/1000ml at 0.25ml/s with 23.8psi vacuum @11:56:37.94 Cartridge 46 sampling 852/1000ml at 0.27ml/s with 24.3psi vacuum @11:57:37.94 Cartridge 46 sampling 868/1000ml at 0.31ml/s with 20.6psi vacuum @11:58:37.94 Cartridge 46 sampling 885/1000ml at 0.26ml/s with 25.4psi vacuum @11:59:37.93 Cartridge 46 sampling 901/1000ml at 0.24ml/s with 23.9psi vacuum @12:00:37.94 Cartridge 46 sampling 916/1000ml at 0.24ml/s with 21.9psi vacuum @12:01:37.94 Cartridge 46 sampling 932/1000ml at 0.23ml/s with 24.0psi vacuum @12:02:37.94 Cartridge 46 sampling 947/1000ml at 0.24ml/s with 25.7psi vacuum @12:03:37.94 Cartridge 46 sampling 961/1000ml at 0.27ml/s with 24.2psi vacuum @12:04:37.94 Cartridge 46 sampling 976/1000ml at 0.26ml/s with 24.9psi vacuum @12:05:37.94 Cartridge 46 sampling 990/1000ml at 0.21ml/s with 23.3psi vacuum @12:06:22.19 Intake.close @12:06:22.22 Exhaust.close @12:06:23.02 Sampled 1000.0ml @12:06:23.10 TV.seek :bypass @12:06:24.76 TV.seek :clear @12:06:27.05 -> Cmd.startProcessing @12:06:28.84 SPR.command "read_sequences" @12:06:29.06 SPR.command "stats_on" @12:06:29.10 SPR.command "start 2 0" @12:06:31.10 Begun log /var/log/esp/spr18aug0412h.spr @12:06:31.91 Handoff.select :waste @12:06:32.03 ArS.seek empty @12:06:49.77 PinPort.seek :cartridge @12:06:55.49 LyS1.seek 1350ul @12:07:01.69 PV.seek :reagent @12:07:02.54 AirS.seek :tVent @12:07:04.61 delay 2 seconds @12:07:06.64 AirS.reconfigure EvacAirS @12:07:06.69 AirS.seek :evac @12:07:29.02 delay 15 seconds @12:07:44.04 AirS.reconfigure AirSconfig @12:07:44.09 AirS.seek :tVent @12:07:58.32 delay 2 seconds @12:08:00.34 AirS.reconfigure EvacAirS @12:08:00.40 AirS.seek :evac @12:08:22.72 delay 15 seconds @12:08:37.75 AirS.reconfigure AirSconfig @12:08:37.80 AirS.seek :tVent @12:08:52.03 delay 2 seconds @12:08:54.06 AirS.reconfigure EvacAirS @12:08:54.12 AirS.seek :evac @12:09:16.44 delay 15 seconds @12:09:31.47 AirS.reconfigure AirSconfig @12:09:31.52 AirS.seek :tVent @12:09:45.74 delay 2 seconds @12:09:47.77 AirS.reconfigure EvacAirS @12:09:47.82 AirS.seek :evac @12:10:10.13 delay 15 seconds @12:10:25.16 AirS.reconfigure AirSconfig @12:10:25.21 AirS.seek :tVent @12:10:39.44 delay 2 seconds @12:10:41.47 AirS.reconfigure EvacAirS @12:10:41.52 AirS.seek :evac @12:11:03.84 delay 15 seconds @12:11:18.87 delay 1:30 @12:12:48.90 AirS.reconfigure AirSconfig @12:12:49.00 AirS.seek :fVent @12:12:50.44 delay 15 seconds @12:13:05.46 LyS1.reconfigure SlowLyS1 @12:13:05.56 LyS1.seek 1050ul @12:13:35.60 delay 5 seconds @12:13:40.62 Handoff.select :blocked @12:13:40.78 LyS1.seek 450ul @12:14:40.79 delay 10 seconds @12:14:50.82 AirS.reconfigure SlowAirS @12:14:50.93 AirS.reconfigure to mix into 1.37806 parts LyS1 @12:14:51.28 AirS.seek evac @12:14:51.32 LyS1.seek 300ul @12:15:06.43 AirS.reconfigure AirSconfig @12:15:06.49 AirS.seek :full @12:15:20.70 LyS1.seek :empty @12:15:50.81 PuckHeater.seek 86.1C @12:17:14.26 PuckHeater.hold 15:00,86.1C @12:32:13.09 LyS1.reconfigure LyS1config @12:32:13.18 LyS1.seek 900ul @12:32:21.51 AirS.seek :tVent @12:32:21.60 delay 2 seconds @12:32:23.63 AirS.reconfigure HalfSpeedAirS @12:32:23.68 AirS.seek :evac @12:32:51.42 delay 15 seconds @12:33:06.45 AirS.reconfigure AirSconfig @12:33:06.50 AirS.seek :tVent @12:33:20.71 delay 2 seconds @12:33:22.74 AirS.reconfigure HalfSpeedAirS @12:33:22.79 AirS.seek :evac @12:33:50.53 delay 15 seconds @12:34:05.57 AirS.reconfigure AirSconfig @12:34:05.62 AirS.seek :tVent @12:34:19.86 delay 2 seconds @12:34:21.89 AirS.reconfigure HalfSpeedAirS @12:34:21.94 AirS.seek :evac @12:34:49.66 delay 15 seconds @12:35:04.68 delay 1:00 @12:36:04.71 Handoff.select :waste @12:36:04.82 delay 15 seconds @12:36:19.86 AirS.seek :fVent @12:36:22.05 delay 10 seconds @12:36:32.08 AirS.reconfigure AirSconfig @12:36:32.13 AirS.seek :evac @12:36:33.57 Lysis Recovered in LyS1 @12:36:33.58 Lysis Complete @12:36:33.59 Handoff.select :waste @12:36:33.62 LyS2.seek :full @12:36:33.70 LyS1.reconfigure DAmixLyS1 @12:36:33.76 LyS2.reconfigure DAmixLyS2 @12:36:34.18 LyS2.seek 1480ul @12:36:34.22 LyS1.seek 650ul @12:37:21.53 delay 5 seconds @12:37:26.55 Handoff.select :SPR @12:37:26.66 SPR.command "start 1 14" @12:37:27.62 Running Experiment-Rep #1 @12:37:27.63 delay 10 seconds @12:37:37.65 SPR.command "start 1 0" @12:37:40.99 Waiting up to 4:00 for SPR to enter state 1 @12:39:45.23 SPR.command "hold_on" @12:39:46.98 LyS2.seek 1130ul @12:39:47.01 LyS1.seek 300ul @12:40:53.20 delay 15 seconds @12:41:08.22 SPR.command "hold_off" @12:41:11.44 Waiting up to 25:00 for SPR to enter state 7 @13:01:16.28 Handoff.select :waste @13:01:16.40 LyS1.reconfigure LyS1config @13:01:16.47 LyS2.reconfigure LyS2config @13:01:16.53 Rep #1 SPR Analysis has Completed @13:01:17.22 Ended log /var/log/esp/spr18aug0412h.spr @13:01:17.24 SPR.command "stats_off" @13:01:19.47 -> Cmd.stop @13:01:19.56 Handoff.select :close @13:01:19.73 Gate.power :heat,:OFF @13:01:19.75 Gate.power :cartridge,:OFF @13:01:19.78 PV.seek :locked @13:01:20.68 PinPort.seek :clear @13:01:26.45 ArS.seek :clear @13:01:26.57 LyS1.seek :clear @13:01:26.71 LyS2.seek :clear @13:01:26.90 AirS.seek :clear @13:01:44.21 ArS.coast @13:01:44.26 LyS1.coast @13:01:44.31 LyS2.coast @13:01:44.35 AirS.coast @13:01:44.41 TV.coast @13:01:44.46 SP.coast @13:01:44.51 SC.coast @13:01:44.56 PV.coast @13:01:44.61 PinPort.coast @13:01:44.79 Gate.power :motor,:OFF @13:01:44.81 Gate.power :main,:OFF @13:01:44.83 Gate.power :core,:OFF @13:01:44.85 Gate.power :analytic1,:OFF @13:01:44.87 Gate.power :analytic2,:OFF @13:01:44.89 Gate.power :analytic3,:OFF @13:01:44.91 Safely stopped and ready to power off