@02:41:42.01PDT05-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @02:41:42.03 >BREAK< ESP3 Gateway v0.99 for cartridge bus @02:41:43.28 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @02:41:44.47 Polling Can every 5:00 @02:41:44.78 Clients may connect on TCP port 9999 Connecting to 10.89.5.2:9999 @02:41:44.81 Waiting for espclients... @02:41:45.16 Session Begun @02:41:47.12 -> showStatus @02:41:49.13 -> Cmd.loadCartridge @02:41:49.25 Gate.power :main,:ON,limit to 5000mA @02:41:49.27 Gate.power :analytic1,:ON,limit to 5000mA @02:41:49.29 Gate.power :analytic2,:ON,limit to 5000mA @02:41:49.31 Gate.power :analytic3,:ON,limit to 5000mA @02:41:49.45 Powering core bus @02:41:51.75 SPR Module 1, FW Rev. B, FPGA Rev. C @02:41:51.84 ArS.configure ArSconfig @02:41:51.94 LyS1.configure LyS1config @02:41:52.06 LyS2.configure LyS2config @02:41:52.17 AirS.configure AirSconfig @02:41:52.29 TV.configure TVconfig @02:41:52.40 SP.configure SPconfig @02:41:52.52 SC.configure SCconfig @02:41:52.64 PV.configure PVconfig @02:41:52.76 PinPort.configure PPconfig @02:41:52.88 Sea.configure SPconfig @02:41:52.93 All elf controllers running firmware version 4.46 @02:41:52.96 Gate.power :motor,:ON,limit to 5000mA @02:41:53.46 PV.reconfigure PVconfig @02:41:53.52 TV.reconfigure TVconfig @02:41:53.57 LyS2.reconfigure LyS2config @02:41:53.60 PinPort.reconfigure PPconfig @02:41:53.63 LyS1.reconfigure LyS1config @02:41:53.66 ArS.reconfigure ArSconfig @02:41:53.73 AirS.reconfigure AirSconfig @02:41:53.99 PV.home.jog 0 @02:41:54.00 TV.home.jog 0 @02:41:54.05 LyS2.home.jog 0 @02:41:54.09 LyS1.home.jog 0 @02:41:54.12 PinPort.home.jog 0 @02:41:54.13 AirS.home.jog 0 @02:41:54.21 ArS.home.jog 0 @02:41:54.73 TV.reconfigure HomeTV @02:41:54.79 PV.reconfigure HomePV @02:41:54.90 LyS2.reconfigure HomeSyringe @02:41:54.95 PinPort.reconfigure HomePP @02:41:55.09 TV.jog -550 @02:41:55.15 PV.jog -1502 @02:41:55.18 PinPort.jog -107 @02:41:55.20 LyS2.jog -277 @02:41:55.45 LyS1.reconfigure HomeSyringe @02:41:55.47 AirS.reconfigure HomeMagSyringe @02:41:55.51 ArS.reconfigure HomeMagSyringe @02:41:55.64 LyS1.jog -282 @02:41:55.68 AirS.jog -336 @02:41:55.70 ArS.jog -287 @02:41:55.86 PinPort.setRawPosition! 0 @02:41:55.91 PinPort.seek :home @02:41:56.00 PinPort.reconfigure PPconfig @02:41:56.22 LyS2.setRawPosition! -50 @02:41:56.38 LyS2.seek :home @02:41:56.48 PV.setRawPosition! -50 @02:41:56.51 AirS.setRawPosition! -50 @02:41:56.53 LyS1.setRawPosition! -50 @02:41:56.56 ArS.setRawPosition! -50 @02:41:56.67 PV.seek :home @02:41:56.74 AirS.seek :home @02:41:56.76 ArS.seek :home @02:41:56.82 LyS1.seek :home @02:41:57.06 LyS2.reconfigure LyS2config @02:41:57.19 PV.reconfigure PVconfig @02:41:57.24 TV.setRawPosition! 0 @02:41:57.26 AirS.reconfigure AirSconfig @02:41:57.38 TV.seek :home @02:41:57.50 TV.reconfigure TVconfig @02:41:57.53 LyS1.reconfigure LyS1config @02:41:57.56 ArS.reconfigure ArSconfig @02:41:58.17 TV.seek :clear @02:41:59.78 TV.coast @02:41:59.83 SC.reconfigure HomeSC @02:41:59.90 SC.home.jog 0 @02:42:00.64 SC.reconfigure SCconfig @02:42:00.71 SC.seek 43 @02:42:00.78 Selecting Cartridge 42 @02:42:01.07 SC.seek 42 @02:42:01.57 LyS2.seek :locked @02:42:01.70 PV.seek :locked @02:42:01.83 AirS.seek :locked @02:42:05.91 Powering cartridge bus @02:42:08.04 Gate.setIR 1750,5000,0,6 @02:42:08.17 Gate.setIR 0,5000,0,6 @02:42:08.22 Loaded Lyse-n-Go Cartridge @02:42:08.23 PuckHeater.configure HeatConfig @02:42:08.29 Gate.power :heat,:ON,limit to 5000mA @02:42:28.03 -> Cmd.startFiltering @02:42:28.25 Duration of filtering limited to 1:05:00 @02:42:28.51 Priming sample loop w/100ml, bypass w/10ml @02:42:28.58 SP.setPosition! 0ml @02:42:28.62 Intake.open @02:42:28.66 Exhaust.open @02:42:29.45 Sea @-42.9psia @02:42:29.46 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @02:42:35.24 Vacuum tare is 23% of full scale @02:42:35.26 PB.open @02:42:35.30 Exhaust.close @02:42:36.09 Sea @-42.9psia @02:42:36.18 SP.reconfigure SPprime @02:42:36.24 SP.seek 10ml,1:21 @02:42:47.12 SP.setPosition! 0ml @02:42:47.17 PB.close @02:42:47.20 Exhaust.open @02:42:47.99 Sea @-42.9psia @02:42:48.07 SP.reconfigure SPprime @02:42:48.14 SP.seek 100ml,8:51 @02:44:42.61 Pressurizing cartridge to 26psi @02:44:42.62 Intake.close @02:44:43.39 SP.setPosition! 0ml @02:44:43.44 PB.open @02:44:44.19 TV.seek :crack @02:44:44.98 TV.seek :clear @02:44:45.77 Intake.open @02:44:47.22 PB.close @02:44:47.93 Exhaust.close @02:44:48.70 Sea @-42.9psia @02:44:48.78 SP.reconfigure SPcharge @02:44:48.84 SP.seek 7.5ml,1:08 @02:44:58.05 Cartridge pressurized with 0.394ml to 26.2psi @02:44:58.42 delay 3 seconds @02:45:01.49 Cartridge at 23.1psi 3 seconds later @02:45:01.57 TV.seek :cartridge @02:45:03.40 TV.seek :clear @02:45:05.22 Sampling 1000.0ml @02:45:05.23 SP.setPosition! 0ml @02:45:05.28 Exhaust.open @02:45:06.06 Sea @-42.9psia @02:45:06.15 SP.reconfigure SPsample @02:45:06.21 SP.seek 1000ml,1:23:53 @02:45:07.17 Cartridge 42 sampling 0/1000ml at 0.17ml/s with 3.6psi vacuum @02:46:07.18 Cartridge 42 sampling 32/1000ml at 0.55ml/s with 24.0psi vacuum @02:47:07.17 Cartridge 42 sampling 63/1000ml at 0.54ml/s with 22.4psi vacuum @02:48:07.18 Cartridge 42 sampling 94/1000ml at 0.53ml/s with 23.1psi vacuum @02:49:07.18 Cartridge 42 sampling 125/1000ml at 0.51ml/s with 19.5psi vacuum @02:50:07.18 Cartridge 42 sampling 156/1000ml at 0.52ml/s with 24.6psi vacuum @02:51:07.18 Cartridge 42 sampling 186/1000ml at 0.47ml/s with 23.4psi vacuum @02:52:07.17 Cartridge 42 sampling 216/1000ml at 0.48ml/s with 20.2psi vacuum @02:53:07.18 Cartridge 42 sampling 246/1000ml at 0.47ml/s with 23.6psi vacuum @02:54:07.18 Cartridge 42 sampling 275/1000ml at 0.45ml/s with 22.8psi vacuum @02:55:07.18 Cartridge 42 sampling 303/1000ml at 0.45ml/s with 18.4psi vacuum @02:56:07.18 Cartridge 42 sampling 331/1000ml at 0.47ml/s with 20.9psi vacuum @02:57:07.17 Cartridge 42 sampling 358/1000ml at 0.45ml/s with 25.9psi vacuum @02:58:07.18 Cartridge 42 sampling 385/1000ml at 0.42ml/s with 20.0psi vacuum @02:59:07.18 Cartridge 42 sampling 412/1000ml at 0.46ml/s with 21.3psi vacuum @03:00:07.18 Cartridge 42 sampling 438/1000ml at 0.44ml/s with 25.5psi vacuum @03:01:07.44 Cartridge 42 sampling 464/1000ml at 0.45ml/s with 21.5psi vacuum @03:02:07.17 Cartridge 42 sampling 489/1000ml at 0.43ml/s with 19.7psi vacuum @03:03:07.18 Cartridge 42 sampling 515/1000ml at 0.45ml/s with 24.6psi vacuum @03:04:07.18 Cartridge 42 sampling 540/1000ml at 0.44ml/s with 21.2psi vacuum @03:05:07.18 Cartridge 42 sampling 564/1000ml at 0.37ml/s with 22.4psi vacuum @03:06:07.18 Cartridge 42 sampling 588/1000ml at 0.43ml/s with 25.1psi vacuum @03:07:07.18 Cartridge 42 sampling 612/1000ml at 0.40ml/s with 18.3psi vacuum @03:08:07.18 Cartridge 42 sampling 636/1000ml at 0.38ml/s with 18.7psi vacuum @03:09:07.18 Cartridge 42 sampling 659/1000ml at 0.42ml/s with 21.6psi vacuum @03:10:07.18 Cartridge 42 sampling 682/1000ml at 0.36ml/s with 20.6psi vacuum @03:11:07.18 Cartridge 42 sampling 705/1000ml at 0.35ml/s with 21.9psi vacuum @03:12:07.18 Cartridge 42 sampling 728/1000ml at 0.39ml/s with 20.2psi vacuum @03:13:07.18 Cartridge 42 sampling 750/1000ml at 0.36ml/s with 25.1psi vacuum @03:14:07.18 Cartridge 42 sampling 772/1000ml at 0.34ml/s with 20.7psi vacuum @03:15:07.18 Cartridge 42 sampling 794/1000ml at 0.35ml/s with 18.8psi vacuum @03:16:07.18 Cartridge 42 sampling 816/1000ml at 0.37ml/s with 19.8psi vacuum @03:17:07.18 Cartridge 42 sampling 837/1000ml at 0.36ml/s with 25.9psi vacuum @03:18:07.18 Cartridge 42 sampling 858/1000ml at 0.35ml/s with 18.7psi vacuum @03:19:07.18 Cartridge 42 sampling 878/1000ml at 0.32ml/s with 21.6psi vacuum @03:20:07.18 Cartridge 42 sampling 899/1000ml at 0.32ml/s with 19.0psi vacuum @03:21:07.18 Cartridge 42 sampling 919/1000ml at 0.38ml/s with 22.4psi vacuum @03:22:07.18 Cartridge 42 sampling 939/1000ml at 0.30ml/s with 25.2psi vacuum @03:23:07.18 Cartridge 42 sampling 959/1000ml at 0.30ml/s with 21.0psi vacuum @03:24:07.18 Cartridge 42 sampling 978/1000ml at 0.33ml/s with 18.8psi vacuum @03:25:07.18 Cartridge 42 sampling 997/1000ml at 0.35ml/s with 22.9psi vacuum @03:25:20.79 Intake.close @03:25:20.84 Exhaust.close @03:25:21.60 Sampled 1000.0ml @03:25:21.68 TV.seek :bypass @03:25:23.30 TV.seek :clear @03:25:25.62 -> Cmd.startProcessing @03:25:27.41 SPR.command "read_sequences" @03:25:27.82 SPR.command "stats_on" @03:25:27.86 SPR.command "start 2 0" @03:25:29.87 Begun log /var/log/esp/spr18aug0503h.spr @03:25:30.89 AnalyticModule::ReadTimeout in PROCESSING -- No response from SPR on AMspr (try 1 of 3) @03:25:32.56 Handoff.select :waste @03:25:32.67 ArS.seek empty @03:25:50.41 PinPort.seek :cartridge @03:25:56.13 LyS1.seek 1350ul @03:26:02.08 PV.seek :reagent @03:26:02.91 AirS.seek :tVent @03:26:05.23 delay 2 seconds @03:26:07.25 AirS.reconfigure EvacAirS @03:26:07.31 AirS.seek :evac @03:26:29.61 delay 15 seconds @03:26:44.64 AirS.reconfigure AirSconfig @03:26:44.70 AirS.seek :tVent @03:26:58.90 delay 2 seconds @03:27:00.93 AirS.reconfigure EvacAirS @03:27:01.01 AirS.seek :evac @03:27:23.32 delay 15 seconds @03:27:38.35 AirS.reconfigure AirSconfig @03:27:38.41 AirS.seek :tVent @03:27:52.62 delay 2 seconds @03:27:54.65 AirS.reconfigure EvacAirS @03:27:54.70 AirS.seek :evac @03:28:17.01 delay 15 seconds @03:28:32.04 AirS.reconfigure AirSconfig @03:28:32.10 AirS.seek :tVent @03:28:46.31 delay 2 seconds @03:28:48.34 AirS.reconfigure EvacAirS @03:28:48.41 AirS.seek :evac @03:29:10.71 delay 15 seconds @03:29:25.74 AirS.reconfigure AirSconfig @03:29:25.80 AirS.seek :tVent @03:29:40.01 delay 2 seconds @03:29:42.04 AirS.reconfigure EvacAirS @03:29:42.09 AirS.seek :evac @03:30:04.40 delay 15 seconds @03:30:19.43 delay 1:30 @03:31:49.47 AirS.reconfigure AirSconfig @03:31:49.53 AirS.seek :fVent @03:31:51.20 delay 15 seconds @03:32:06.23 LyS1.reconfigure SlowLyS1 @03:32:06.34 LyS1.seek 1050ul @03:32:36.38 delay 5 seconds @03:32:41.41 Handoff.select :blocked @03:32:41.57 LyS1.seek 450ul @03:33:41.56 delay 10 seconds @03:33:51.59 AirS.reconfigure SlowAirS @03:33:51.70 AirS.reconfigure to mix into 1.37806 parts LyS1 @03:33:52.06 AirS.seek evac @03:33:52.12 LyS1.seek 300ul @03:34:07.19 AirS.reconfigure AirSconfig @03:34:07.25 AirS.seek :full @03:34:21.47 LyS1.seek :empty @03:34:51.56 PuckHeater.seek 86.3C @03:36:06.58 PuckHeater.hold 15:00,86.3C @03:51:07.60 LyS1.reconfigure LyS1config @03:51:07.66 LyS1.seek 900ul @03:51:16.05 AirS.seek :tVent @03:51:16.13 delay 2 seconds @03:51:18.15 AirS.reconfigure HalfSpeedAirS @03:51:18.22 AirS.seek :evac @03:51:45.97 delay 15 seconds @03:52:00.99 AirS.reconfigure AirSconfig @03:52:01.06 AirS.seek :tVent @03:52:15.28 delay 2 seconds @03:52:17.30 AirS.reconfigure HalfSpeedAirS @03:52:17.36 AirS.seek :evac @03:52:45.09 delay 15 seconds @03:53:00.12 AirS.reconfigure AirSconfig @03:53:00.18 AirS.seek :tVent @03:53:14.39 delay 2 seconds @03:53:16.42 AirS.reconfigure HalfSpeedAirS @03:53:16.49 AirS.seek :evac @03:53:44.23 delay 15 seconds @03:53:59.27 delay 1:00 @03:54:59.29 Handoff.select :waste @03:54:59.39 delay 15 seconds @03:55:14.41 AirS.seek :fVent @03:55:16.61 delay 10 seconds @03:55:26.64 AirS.reconfigure AirSconfig @03:55:26.69 AirS.seek :evac @03:55:28.13 Lysis Recovered in LyS1 @03:55:28.15 Lysis Complete @03:55:28.17 Handoff.select :waste @03:55:28.21 LyS2.seek :full @03:55:28.29 LyS1.reconfigure DAmixLyS1 @03:55:28.35 LyS2.reconfigure DAmixLyS2 @03:55:28.74 LyS2.seek 1480ul @03:55:28.78 LyS1.seek 650ul @03:56:16.13 delay 5 seconds @03:56:21.15 Handoff.select :SPR @03:56:21.28 SPR.command "start 1 14" @03:56:22.59 Running Experiment-Rep #1 @03:56:22.60 delay 10 seconds @03:56:32.62 SPR.command "start 1 0" @03:56:35.95 Waiting up to 4:00 for SPR to enter state 1 @03:58:40.21 SPR.command "hold_on" @03:58:41.95 LyS2.seek 1130ul @03:58:41.98 LyS1.seek 300ul @03:59:48.19 delay 15 seconds @04:00:03.21 SPR.command "hold_off" @04:00:05.92 Waiting up to 25:00 for SPR to enter state 7 @04:20:10.31 Handoff.select :waste @04:20:10.43 LyS1.reconfigure LyS1config @04:20:10.49 LyS2.reconfigure LyS2config @04:20:10.79 Rep #1 SPR Analysis has Completed @04:20:11.24 Ended log /var/log/esp/spr18aug0503h.spr @04:20:11.26 SPR.command "stats_off" @04:20:13.24 -> Cmd.stop @04:20:13.32 Handoff.select :close @04:20:13.49 Gate.power :heat,:OFF @04:20:13.51 Gate.power :cartridge,:OFF @04:20:13.54 PV.seek :locked @04:20:14.43 PinPort.seek :clear @04:20:20.22 ArS.seek :clear @04:20:20.35 LyS1.seek :clear @04:20:20.48 LyS2.seek :clear @04:20:20.61 AirS.seek :clear @04:20:37.95 ArS.coast @04:20:38.00 LyS1.coast @04:20:38.05 LyS2.coast @04:20:38.10 AirS.coast @04:20:38.15 TV.coast @04:20:38.20 SP.coast @04:20:38.25 SC.coast @04:20:38.30 PV.coast @04:20:38.35 PinPort.coast @04:20:38.54 Gate.power :motor,:OFF @04:20:38.55 Gate.power :main,:OFF @04:20:38.58 Gate.power :core,:OFF @04:20:38.60 Gate.power :analytic1,:OFF @04:20:38.62 Gate.power :analytic2,:OFF @04:20:38.64 Gate.power :analytic3,:OFF @04:20:38.66 Safely stopped and ready to power off